Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0870 ATGGACAATCTTGGCCAAATCGGTGAATCTCAAGGCTACTCAACTGAATCCATCGATTCCATCATCTCAATCGTTAGCATTTTCAACTTCTCCGGTAGAATCTTTTCTGGGTTTGCTTCAGAAATCTTGCTAGAGAAACTCAAATTCCCTAGACCATTGATGCTCACTTTCACTCTTTTGATCTCTTGTATTGGACATATCTTAGTAGCTTTTCCCTTCCATCAATCTCTTTACATTGCATCAATCATAATGGGGTTTTGTTTGGGTTCTCAAATTCCATTGTATTTCGCTATGATTTCAGAGATTTTTGGTCTCAAACATTACTCCATGTTGTACAATTTCGGCCAACTCTCTTGCCCTGTTGGGACTTGTGTTCTCAATGTATTGGTGGCCGGGAAATTCTACGACGAGGAAGCGAAGTCGAGTGTTAATTCAACCCAATTTAAATGCGAAGGGGAACTATGTTATAGAAATTCTTTTGCGATTTTGACTGGGATGTCGTTGTTAGGAGCTGCAATTTCATTGATTTTGGTTAGAAGAATGAGCGAGTTTTTACAGAGGAGATATACACAAGAAGTTTAG 582 39.0 MDNLGQIGESQGYSTESIDSIISIVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEFLQRRYTQEV 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3217614 3218195 + CmPI595203_03g008700.1 Cmu03g0870 411656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0870 193 SUPERFAMILY MFS general substrate transporter 9 181 IPR036259 -
Cmu03g0870 193 Pfam Major Facilitator Superfamily 7 180 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu03g0870 193 Gene3D MFS general substrate transporter like domains 4 186 IPR036259 -
Cmu03g0870 193 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 180 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0870 Cmu-Chr3:3217614 Cmu05g2184 Cmu-Chr5:31288056 4.20E-52 dispersed
Cmu03g0868 Cmu-Chr3:3192910 Cmu03g0870 Cmu-Chr3:3217614 1.20E-67 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0870 - - - 0.0