Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0875 ATGGATTCAGAAGTATGGGCATTTACAAAACAAGTTTTAGCAGGACGATGGTTTTCGGTATTCGCCGGCTTAATAATGATGCTTGGCAATGGCTCCACTTACATCTATGGAACATATTCAAAAGTCATCAAGACCCGATTTGATTATAGCCAAACCCAAATTAACATATTAGGATTTGCTAAAGATCTCGGCTCCAATGTCGGTATTTTCGCGGGTCTTCTAGCCGAGGTGGCTCCGCCGTGGGTTCTCTTCGTACTCGGTGCTGCCCAGAACTTCGCTGGGTTCTTCTTGATATGGCTGGCCATCACACACCGTATCCCTCAACCAAAATTCTGGCAAATGTTCCTTTTCGTTTGCTTTGGTACTAATTCTTCAAATTTTGGAAATACAGCCATTATGGTGGCTAGTGTAAGAAACTTCCCTGACCGTCGTGGTATCATTTTGGGGTTGCTGAAAGGGTTTGTTGGTATTGGTGGTGCTGTTTATACCCAAATATATTTAGGTCTTTACGGCCATGAAGATCCAGCTAATCTTGTTCTTCTTTTTGCTTGGCTTCCCTCTACAGTAATCCTAATTCTTTTCCCATCAATTCGATCAATCCGTATCCGTAAACATCCTGAAGAACTCAAAGTGTTTTACCATTTACTTTACGTCTCTATCGTTATAGCTCTGTTCATCCTGTTTTTAACCCTTGCACAGAAAGAAGTTGTTTTCTCTCAAGCTGGGTATGGGAGTGGAGCAACCGTGGTAGTTGCGTTACTATTCCTACCCCTTTTAATCACATGTAGAGAAGAATTCTTATTGTACAGACTCAACAAACGAAACGATGACGCTTCGGTTACTCTATCCGTCAATGAGCAAAAGCCTCCCACCGTAATCACAACAGAGAAAACAGAGATTTCGGGGTCGTGTTTGTCAAGAGTATGGAATAAACCTGAAAGAGGGGAAGATTTCACCATCTTGCAAGCTATCTTCAGTATAGATATGGCTCTTATTTATCTAGCTACTTTTTCTGGTTCTGGTTCTTCTCTTGCAGCCATTGATAATTTGGGCCAGATTGGTGAATCACTTGGCTACCCACCACGAGCGATAAGCATCTTCGTTTCTTGGGTTTCCGTATTCAATTTCTTCGGCCGAGTCTTCTCCGGTTTCATCTCGGAAACTATGATGACTAAATACAAATTACCTCGTCCTCTATTATTTTCTTTTGCCTTTCTCATCACTTGCATTGGCCAGCTTATCATCGCGTATCCCACTCGGGGTTCGGTCTACCTTGCTTCCATGATTATCGGGTTCGGGTTCGGAACTCAAGTGCCATTGCTATTCTCCATAATCTCTGAGATTTTTGGGCTAAAACATTACTCCACATTGTTCAATTTTGGGCAATTGGTAGTCCCAATTGGGTCTTATTTACTAAACGTGGATGTTGTAGGCAGGTTGTACGATAAGGAAGCATTACATGAAGGTAGAAAGATGACGGGCAAGGGGATAACTTGCACCGGAGCTCATTGCTTTAGTGGATCTTTCACTACTTTGGCTGCAGCGACATTGTTTGCAGCTTTGATTATGCTTGTGTTGGCTTATAGGACTCGAGAATTCTACAATGGAGATGTATACAAGAAATACAGAGAGGATATGTGGATTTCGCAAACCGAAATAGAGTTCTATCGCGTAGACAAAAAGACACTTGACGACTAA 1698 42.23 MDSEVWAFTKQVLAGRWFSVFAGLIMMLGNGSTYIYGTYSKVIKTRFDYSQTQINILGFAKDLGSNVGIFAGLLAEVAPPWVLFVLGAAQNFAGFFLIWLAITHRIPQPKFWQMFLFVCFGTNSSNFGNTAIMVASVRNFPDRRGIILGLLKGFVGIGGAVYTQIYLGLYGHEDPANLVLLFAWLPSTVILILFPSIRSIRIRKHPEELKVFYHLLYVSIVIALFILFLTLAQKEVVFSQAGYGSGATVVVALLFLPLLITCREEFLLYRLNKRNDDASVTLSVNEQKPPTVITTEKTEISGSCLSRVWNKPERGEDFTILQAIFSIDMALIYLATFSGSGSSLAAIDNLGQIGESLGYPPRAISIFVSWVSVFNFFGRVFSGFISETMMTKYKLPRPLLFSFAFLITCIGQLIIAYPTRGSVYLASMIIGFGFGTQVPLLFSIISEIFGLKHYSTLFNFGQLVVPIGSYLLNVDVVGRLYDKEALHEGRKMTGKGITCTGAHCFSGSFTTLAAATLFAALIMLVLAYRTREFYNGDVYKKYREDMWISQTEIEFYRVDKKTLDD 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3239077 3240774 + CmPI595203_03g008750.1 Cmu03g0875 411661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0875 565 Gene3D MFS general substrate transporter like domains 316 535 IPR036259 -
Cmu03g0875 565 SUPERFAMILY MFS general substrate transporter 16 532 IPR036259 -
Cmu03g0875 565 Gene3D MFS general substrate transporter like domains 14 282 IPR036259 -
Cmu03g0875 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 543 - GO:0016020(PANTHER)
Cmu03g0875 565 Pfam Nodulin-like 16 261 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0875 Cmu-Chr3:3239077 Cmu03g0877 Cmu-Chr3:3248549 6.70E-215 dispersed
Cmu03g0875 Cmu-Chr3:3239077 Cmu03g0876 Cmu-Chr3:3243304 3.90E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0875 - - - 0.0