Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0877 ATGGCCGACAACTTTCTCCCCGAAACCTGCCGTTTCCTCAAACAACTTGGAGAAGGACGATGGTTTTCAGTATTCGCTTCTTTTCTAATCATGATCGGCGCAGGTTCAACTTACGTTTTCGGAACATACTCCAAAGTATTGAAAACCCAATTCGATTATGATCAAACCCAAATCAACACATTGGGATTTGCCAAAGATCTCGGCTCCAACCTCGGTGTTTTCGCCGGCCTTCTCGGCGAGGTGGCGCCGCCGTGGGTTCTGTTCATCGTCGGTTCATCTCTCAATTTCTACAGCTACTTCATGATTTGGCTCTCCATCACTCGCCGTATCGCCAAACCCAGTTTATGGAAAATGTTCTTCTACATTTCCTTAGCTGCCAATTCACAAAATTTCGCTAATACAGCCGTTTTAGTAACCAGCGTCAGGAATTTCCCTGATCGACGGGGAATTATTCTCGGACTTCTCAAAGGCTTTGTCGGAATCGGAGGTGCCATTTTAACTCAATTCTATTTAGCCATTTACGGCCATGAAAATCCAGCTAGTTTGGTTCTTCTTCTTTCATGGTTGCCCACTTTTGTGTCTTTGGTATTTTGTCTCGTGATTCGAACAATCAATATCCGTAAACATCCTGAAGAACTCAGAGTTCTTTACCATTTGCTTTATGTCTCAGTAATTCTTGCTCTGTTTCTCTTATTTCTAACCATTACCCAAAAACAAACTGAGTTTTCTTCAGCTGGGTATATAAGTGGAGCTGCCGTCATTGTTGGATTACTATCCATTCCTCTTTTAATCGCCATTAGAGAAGAACTCATTCTCTTCAAACTCAACAAACAAACCAACAAAATTCAACCCACCCCTGTTTTCGTTCCTGAACAAAAACCTTCATCAAATCCCCCACCTACCAACAATGATTCCTTAACCCCACTTGAGGAAATTTCAGAAACTGATTCTCCATCATGTTTCTCAAACATACTCAACAAACCAGAAAGAGGATCAGATTACACCATTTTACAAGCTCTGTTCAGCAAAGACATGGCGCTTGTTTTCGTAGGAACACTTTGTGGGTGTGGTTCATCACTTGCTGCCATTGACAACATAGGCCAAATTGGTGAATCACTTGGCTATCCATCTCAATCCATAAGCATCTTCGTTTCATGGGTTTCTATATTCAATTTCTTCGGCAGAGTGGGGTCTGGCTTCATCTCTGAAACTCTCATGACAAAATACAAATTACCTCGTCCTTTAATGTTCGCTTTCTCCCATCTTCTAACCTGCATTGGCATGCTCTTCATTGCCTTCCCATATTCCGGCTCAATCTACATAGCTTCATTGATCATCGGGTTCGGATTCGGAGCTCAAGTTCCGATGGTTTTCGCCATAATTTCGGAACTTTTCGGTCTGAAATATTACGCAACCATCTTCAATTGTGCACAATTGGCAGTCCCCATTGGATCCTATGTACTAAATGTGGATGTAATTGGGAGATTATATGATATTGAAGCCATAAAAGATGGGGGAATTAAGAATGGGAAAGGACTAACTTGCCATGGAATTCATTGTTTTAGTGGGTCATTCTTGATTTTGGCTGTGGTGGTGTTGATTGGAGCTTTGGCTTCGCTTGTGTTGGCTTTCAGGACGAGAGATTTTTACAGAGGGGATGTTTATAAGAAGTATAAAGAGGATATGTGGATTCCTCAATCGGATATGGAATTTTATTGTTTAGATAACAAGAAGAAAGTTGATAACAATTTGCAGCGGACTGTCATGCCGCCTAAATATAGTTTTCTCAATATAATATAG 1800 41.28 MADNFLPETCRFLKQLGEGRWFSVFASFLIMIGAGSTYVFGTYSKVLKTQFDYDQTQINTLGFAKDLGSNLGVFAGLLGEVAPPWVLFIVGSSLNFYSYFMIWLSITRRIAKPSLWKMFFYISLAANSQNFANTAVLVTSVRNFPDRRGIILGLLKGFVGIGGAILTQFYLAIYGHENPASLVLLLSWLPTFVSLVFCLVIRTINIRKHPEELRVLYHLLYVSVILALFLLFLTITQKQTEFSSAGYISGAAVIVGLLSIPLLIAIREELILFKLNKQTNKIQPTPVFVPEQKPSSNPPPTNNDSLTPLEEISETDSPSCFSNILNKPERGSDYTILQALFSKDMALVFVGTLCGCGSSLAAIDNIGQIGESLGYPSQSISIFVSWVSIFNFFGRVGSGFISETLMTKYKLPRPLMFAFSHLLTCIGMLFIAFPYSGSIYIASLIIGFGFGAQVPMVFAIISELFGLKYYATIFNCAQLAVPIGSYVLNVDVIGRLYDIEAIKDGGIKNGKGLTCHGIHCFSGSFLILAVVVLIGALASLVLAFRTRDFYRGDVYKKYKEDMWIPQSDMEFYCLDNKKKVDNNLQRTVMPPKYSFLNII 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3248549 3250348 - CmPI595203_03g008770.1 Cmu03g0877 411663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0877 599 Pfam Major Facilitator Superfamily 289 481 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu03g0877 599 Pfam Nodulin-like 20 266 IPR010658 -
Cmu03g0877 599 MobiDBLite consensus disorder prediction 286 309 - -
Cmu03g0877 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 559 - GO:0016020(PANTHER)
Cmu03g0877 599 Gene3D MFS general substrate transporter like domains 345 587 IPR036259 -
Cmu03g0877 599 SUPERFAMILY MFS general substrate transporter 22 548 IPR036259 -
Cmu03g0877 599 CDD MFS_Mch1p_like 19 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0875 Cmu-Chr3:3239077 Cmu03g0877 Cmu-Chr3:3248549 6.70E-215 dispersed
Cmu03g0877 Cmu-Chr3:3248549 Cmu03g0879 Cmu-Chr3:3260375 6.00E-206 dispersed
Cmu03g0876 Cmu-Chr3:3243304 Cmu03g0877 Cmu-Chr3:3248549 1.10E-153 tandem
Cmu03g0877 Cmu-Chr3:3248549 Cmu03g0878 Cmu-Chr3:3254460 2.60E-217 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0877 - - - 0.0