Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0879 ATGACAATGGATGCAGCACAAAGTTGGCGATTTGTGAAACAAGTTGTCGAAGGACGATGGTTTTCGGTATTCGCCTCCTTTCTCGTCATGATCGGCTGCGGTTCGCCTTACTTGTTTGGAACATACTCCAAAGTTATAAAGACCAAATTTGATTACAATCAAACCCAACTTACCACTTTAGGATTCGCTAAAGATCTCGGTTCCAACCTCGGAGTTGTCGCGGGACTTTTTGCGGAGGTGGCTCCGCCGTGGTTGCTCTTCCTTGTAGGGTTAACCCTCAACTTCTTCAGCTACTTCATGATATGGCTGTCGGTTACTGAGTATGTCCCAAAGCCCCAATTGTGGCTAATGTTCATTTACATTTTCATTTCCGCTAATGCACAAAACTTTCCCAACACTGTGGTTATGGTCACAAATGTAAGAAACTTTGTTGATCAACGAGGCATTATTTTGGGGCTTCTCAAGGGCTTTGTGGGCCTTGGTGGGGCCATTTTAACTCAAATCTATTTTAGCATTTATGGCAATTTAGATCCTATCCATATTGTCTTCCTTCTTTCATGGCTACCTTCCATTGTATATTTCTTGGTTTTTCTTTCAATTCGAACCATCAAAGCTCCTAAGTATCCACAAGAACTCAAAGTCTTCTACTACTTTCTTTACATAGCCATAACAATAGCCCTCTTCATCTTCTTTCTCACCATAACACAACGAAACACCGTCTTCTCTCATACTAACTACGTCGCCGGCGTCGCCATCATCCTCCTCTTAATCTCTCTTCCTCTTTTGATCGCTATTAAAGAAGAGTTTTTTCTCTTCAAACTCAACCAACACACCAAAGATCCTTCGGTTCTGGTTTCAATTCCTGTTAAAAAACTTGAGGAAATTTCAGAAACTTCTTCACCTCGTTTCTCTAATAATAATAATGGATCTAACAAGCCTCGAAGAGGGGAAGATTTTGGTATCTTACAAGCTTTGTTCAGCAAAGACATGGCTCTTATTTTCATATCAACAGTTTCTGCTTGTGGTTCATCTGTTGCTGCCATGGATAATCTTGGCCAAATCGCGGAGTCACTTAACTATCCATCTCAATCCGTAAGTGTGTTCGTTTCATGGATTTCCATTTTCAATTTCTTTGGTCGGGTTTGCTCTGGTTTCGTCTCCGAAGCTGTTTTGACCAAATACAAATTGCCTCGTCCTTTTATCTTTGGCCTTGCCCAAATATTAACTTGCATTGGCCTAATCTCCATTGCTTTCCCTTATAAAAACTCAGTGTATGTAGCTTCATTGATTATTGGGTTTGGGTTTGGAGCTCAAACCCCGTTGCTATTTGCCTTAATCTCTGATCTCTTTGGCCTTAAACATTACTCAACGCTTCTCAATTGTGGGCAATTGGCAGTCCCATTCGGATCTTATCTAATGAATGTGCATGTAGTAGGCAAGTTTTACGATCGAGAAGCCACTAAAATTGGTAATGTGAAGAATGGGAAGGGCCTAACTTGCATTGGAACTCATTGCTTTGGCGAGTCTTTTGGAATTTTGATTGTGGTGACATTGTTTGGAGCGATGGCTTCGTTTGTGTTGGCTTATAGAACTCGAGAATTTTACAAAGGCGATATATATAAGAGATACAGAGATGATCAAATGTGGGTTACTAAGAACGACAATGAACATACAAAGAAAATTGATGACGGAAGCAAACAAGAGAATTTGGTCAACTAA 1719 40.55 MTMDAAQSWRFVKQVVEGRWFSVFASFLVMIGCGSPYLFGTYSKVIKTKFDYNQTQLTTLGFAKDLGSNLGVVAGLFAEVAPPWLLFLVGLTLNFFSYFMIWLSVTEYVPKPQLWLMFIYIFISANAQNFPNTVVMVTNVRNFVDQRGIILGLLKGFVGLGGAILTQIYFSIYGNLDPIHIVFLLSWLPSIVYFLVFLSIRTIKAPKYPQELKVFYYFLYIAITIALFIFFLTITQRNTVFSHTNYVAGVAIILLLISLPLLIAIKEEFFLFKLNQHTKDPSVLVSIPVKKLEEISETSSPRFSNNNNGSNKPRRGEDFGILQALFSKDMALIFISTVSACGSSVAAMDNLGQIAESLNYPSQSVSVFVSWISIFNFFGRVCSGFVSEAVLTKYKLPRPFIFGLAQILTCIGLISIAFPYKNSVYVASLIIGFGFGAQTPLLFALISDLFGLKHYSTLLNCGQLAVPFGSYLMNVHVVGKFYDREATKIGNVKNGKGLTCIGTHCFGESFGILIVVTLFGAMASFVLAYRTREFYKGDIYKRYRDDQMWVTKNDNEHTKKIDDGSKQENLVN 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3260375 3262093 - CmPI595203_03g008790.1 Cmu03g0879 411665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0879 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 543 - GO:0016020(PANTHER)
Cmu03g0879 572 Pfam Nodulin-like 19 265 IPR010658 -
Cmu03g0879 572 SUPERFAMILY MFS general substrate transporter 20 533 IPR036259 -
Cmu03g0879 572 Gene3D MFS general substrate transporter like domains 329 569 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0877 Cmu-Chr3:3248549 Cmu03g0879 Cmu-Chr3:3260375 6.00E-206 dispersed
Cmu03g0879 Cmu-Chr3:3260375 Cmu05g2184 Cmu-Chr5:31288056 2.20E-141 dispersed
Cmu03g0878 Cmu-Chr3:3254460 Cmu03g0879 Cmu-Chr3:3260375 7.50E-270 tandem
Cmu03g0879 Cmu-Chr3:3260375 Cmu03g0880 Cmu-Chr3:3268369 1.60E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0879 - - - 0.0