Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0880 ATGGGTACAACCACCGGACCCGACGGTCCCCACGGCTACACAGCACTCCGATTCTCCTTGCAGGTCATTAAAGGACGGTGGTTCACCGTGTTCGCTACATTTCTGATCATGGCCGGCGCCGGCGCAACCTATCTCTTCGGTGTCTACTCCAAACAGATCAAAGCGACGCTTGGATATGACCAAACCACTTTGAATCTGATGGGTTTTTCTAAAGATCTGGGTGCTAATGTCGGTGTGCTGTCCGGTTTAGTGGCGGAGGTCACGCCGACTTGGTTCGTTCTCCTCCTTGGCTCCGCCTTGAACTTCACCGGATACTTCATGATTTGGCTTGCGGTTACCGGCAGAATTGCAAAGCCTCAAGTCTGGCAGATGTGTCTTTACATTTGCATTGGAGCGAATTCCCAGAATTTTGCTAATACTGGCGCTTTGGTTACTTGCATCCAGAATTTCCCCGAGAGCCGTGGAGCTATGATGGGGCTTTTGAAGGGCTTCACAGGGCTGAGCGGCGCCATTCTCACACAGATTTATTTGGCCGTCTATGGCGATGATGCCACGGCGTTGATCCTTCTAATTGGGTGGCTCCCGGCGGCGCTCTCCGTCGTTTTTGTTTTCACGATTCGGAGGCTCAGAGCAGAGAGACAACCGAACGAGAAGAGGGTTTTTTACCATTTCCTTTATGTCTCAATCGGGTTAGCGCTTTTCATCATGCTTATGAATATTGTTCAGAAGAAAGTGGAATTCAATCATACGGCTTATGCTATGAGTGCTACTGTGGTTTGCGTATTTCTTTTCCTTCCTCTCTTGATTGTGATCCGGGAAGAGCTTCATCTCTGGAATGCAATGAAAAACCCCCCAATTCCCAACGAAAAGCCACAATCAAAATCTCAACCAAAACCAATTGATGAACCCAAAATCATCACCGAAGAATCAAAAGAAATCAAGGAAATCACAAACCCACCACCAGCGTCCTGTTTCTCCAACATTTGTCACAAACCAGCCAGAGGAGACGATTACACAATTCTCCAAGCACTTCTCAGCGTGGATATGTTGGTTCTCTTCATCGCAACATTCTGTGGATTAGGCACAAGCTTAACCGCAGTAGACAATTTAGGGCAAATCGGTGAATCACTCGGCTACCCATTAAAAACAGTAAAATCATTCGTTTCATTAGTAAGCATTTGGAATTACTTCGGCAGAGTATTCTCTGGATTCGTCTCTGAAACCCTTCTCGCAAAATTCAAATTCCCAAGACCTTTAATGATGACATTAGTTCTTCTTCTCTCTTGCATTGGCCAACTCTTAATCGCATTTCCAGTGCCAGGCTCCGTATACATAGCCTCCGTCATCATCGGATTCTCCTTCGGCGCACAACTTCCCCTGCTTTTCGCCATAATTTCAGAGCTATTCGGACTGAAATATTTCTCCACTTTGTTCAATTGTGGGCAAATCGCGAGCCCGTTAGGATCGTATATTCTGAATGTGAAGGTCGCTGGAATGATGTACGACATGGAAGCTTTAAAGCAGCTGAAGGAGAAGGGGTTAGACAGATCGGCGGTGAAGGAATTGACTTGCATTGGAAAGCAATGTTTCAGGAAATCGTTTACGTTAATGGCGATTGTTACCTTTGTTGGAGCTATGGTTTCACTGGTTTTAGTGATGAGAACAAGGGAGTTTTACAAAGGGGATATTTACAAGAAATTTAGAGACGAAGAACTGAAGGAGGAAACCACCGGAGCAGAGGTTACTGCTCGGGAATCCAAGTAA 1764 46.15 MGTTTGPDGPHGYTALRFSLQVIKGRWFTVFATFLIMAGAGATYLFGVYSKQIKATLGYDQTTLNLMGFSKDLGANVGVLSGLVAEVTPTWFVLLLGSALNFTGYFMIWLAVTGRIAKPQVWQMCLYICIGANSQNFANTGALVTCIQNFPESRGAMMGLLKGFTGLSGAILTQIYLAVYGDDATALILLIGWLPAALSVVFVFTIRRLRAERQPNEKRVFYHFLYVSIGLALFIMLMNIVQKKVEFNHTAYAMSATVVCVFLFLPLLIVIREELHLWNAMKNPPIPNEKPQSKSQPKPIDEPKIITEESKEIKEITNPPPASCFSNICHKPARGDDYTILQALLSVDMLVLFIATFCGLGTSLTAVDNLGQIGESLGYPLKTVKSFVSLVSIWNYFGRVFSGFVSETLLAKFKFPRPLMMTLVLLLSCIGQLLIAFPVPGSVYIASVIIGFSFGAQLPLLFAIISELFGLKYFSTLFNCGQIASPLGSYILNVKVAGMMYDMEALKQLKEKGLDRSAVKELTCIGKQCFRKSFTLMAIVTFVGAMVSLVLVMRTREFYKGDIYKKFRDEELKEETTGAEVTARESK 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3268369 3270132 - CmPI595203_03g008800.1 Cmu03g0880 411666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0880 587 SUPERFAMILY MFS general substrate transporter 26 557 IPR036259 -
Cmu03g0880 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 568 - GO:0016020(PANTHER)
Cmu03g0880 587 FunFam Nodulin family protein 340 561 - -
Cmu03g0880 587 CDD MFS_Mch1p_like 25 545 - -
Cmu03g0880 587 Gene3D MFS general substrate transporter like domains 344 560 IPR036259 -
Cmu03g0880 587 Pfam Nodulin-like 26 271 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1181 Cmu-Chr2:24473580 Cmu03g0880 Cmu-Chr3:3268369 4.50E-83 dispersed
Cmu03g0868 Cmu-Chr3:3192910 Cmu03g0880 Cmu-Chr3:3268369 1.60E-104 dispersed
Cmu03g0878 Cmu-Chr3:3254460 Cmu03g0880 Cmu-Chr3:3268369 2.70E-158 dispersed
Cmu03g0880 Cmu-Chr3:3268369 Cmu05g2184 Cmu-Chr5:31288056 4.40E-193 dispersed
Cmu03g0879 Cmu-Chr3:3260375 Cmu03g0880 Cmu-Chr3:3268369 1.60E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0880 - - - 0.0