Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0932 ATGGAAAGAGCACAAAACGAAATTCGAAGCATTGTTGGTGACAGAAGAGTTGTATCAGAGAGTGATATTTTAGAAATGCCCTACTTGAAAGCTGTGGTTAAAGAGGTGCTTCGATTGCATCCACCAGCGCCGGTTTCACTTCCAAGAGAAACTATGGAAGATGTGAGGATTGAAGGCCATGATATTCCAGCCAAAACGAGAGTTTTTGTGAATGTTTGGGCAACTGGGAGAGACCCAGAATGTTGGAAGGACCCAGAAAGTTTTGAGCCAGAGAGATTTATGGAGAGTGAAGTTGATTACAGAGGGTTGGATTTTGAGTTCATTCCGTTTGGGGTTGGAAGAAGGATTTGTCCAGGTATTACTATGGGGATCGTCATGATTGAGCTTGCTTTGGCTCAGATATTGCATAGCTTTGATTGGGAGCTTCCAAGTGGGATTGAAGCTAAAGATTTGGATATGACGGAAGTTTTTGGTGTCACAATGCATAGAAAAGCTCACTTGGAGGTTGTAGCAAAGCCTTCCTTTGGCTCATCCATCTCAAATTAA 546 42.67 MERAQNEIRSIVGDRRVVSESDILEMPYLKAVVKEVLRLHPPAPVSLPRETMEDVRIEGHDIPAKTRVFVNVWATGRDPECWKDPESFEPERFMESEVDYRGLDFEFIPFGVGRRICPGITMGIVMIELALAQILHSFDWELPSGIEAKDLDMTEVFGVTMHRKAHLEVVAKPSFGSSISN 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3970636 3971181 + CmPI595203_03g009320.1 Cmu03g0932 411718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0932 181 Gene3D Cytochrome P450 1 177 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 PANTHER CYTOCHROME P450 71B11-RELATED 1 171 IPR050193 -
Cmu03g0932 181 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 110 119 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu03g0932 181 Pfam Cytochrome P450 1 164 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 PRINTS P450 superfamily signature 108 117 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 FunFam Predicted protein 1 169 - -
Cmu03g0932 181 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 PRINTS E-class P450 group I signature 117 140 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 PRINTS E-class P450 group I signature 107 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g0932 181 SUPERFAMILY Cytochrome P450 1 173 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0932 Cmu-Chr3:3970636 Cmu05g2646 Cmu-Chr5:35057038 1.00E-55 dispersed
Cmu03g0930 Cmu-Chr3:3954698 Cmu03g0932 Cmu-Chr3:3970636 8.70E-67 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0932 - - - 0.0