Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1028 ATGGCGTCAAGAATCAAAACTGGTGAGGATAGTGACGATAAAGATAGTAGCATCTGGGTTTTGGATCACCAGATGGACCAGCCAATGGAGGAGGAGGCTAGCCGGCTAAGAAATGCGCATCAGGAAAAGGGTCATTCTGTATTTAAAATTCTACAACTTGCATTCCAAAGCCTTGGAATTGTGTACGGAGATTTGGGCACCTCCCCTTTATATGTCTTCTATAACACGTTCCCCGATGGAGTTGAAAATACAGAGGACTTGATAGGAGCTCTGTCATTGATTATATACTCTCTGACTCTCATAACCCTTATCAAGTACGTATTTGTAGTCTGCAAGGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTATATTCATTGCTGAGCCGTCATGCTAAAATATTAACTATCCCTAACCATGACCTCAGTGATGAGAAGCTTACAACTTATAGTCGTTCTAAGTATCGGGAACAATCATTTGCTGCAAAAACTAAGAGATGGCTGGAAGGGCATCATTTTAAGAAACACGCAATTCTTGTTCTCGTTCTTGTTGGCTCCTGCATGGTGATTGGGGATGGAATCCTAACACCTGCTATTTCAGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCATGCAAAAATAAGCAATGATGTAGCTGTTCTTGTTGCTATTGTCATACTTGTGTTCTTGTTTAGCATGCAACGTTATGGCACAGATAAAGTCGGTTGGCTTTTTGCCCCGGTAGTTTTTCTCTGGTTCACCTTAATAGGAGGCATCGGTATATTTAACATCTGCAAATATGATCACAGTGCCCTGAGAGCCTTTTCTCCAGTATATATATATCGGTACTTCAAACGGGGAGGGAAAGCTGGATGGACATCCCTTGGAGGGATCATGCTTAGTATTACAGGAACTGAAGCACTTTTTGCAGACCTATCCCATTTTCCAGTTTCCTCTATACAAATTGCTTTTACAGTAGTTGTATTTCCTTGCCTTCTTCTAGCCTACACTGGGCAAGTTGCCTATCTCATGAAAAACCCAGATTATGTTATTGGTGCCTTCTACCATTCAATCCCAGAAAGTATATATTGGCCAGTATTTCTTGTTGCAACTACCGCCGCTATCGTTGCAAGCCAAGCCACCATATCTGCAACCTTTTCATTAGTCAAGCAAGCTCTTGCACTTGGTTGCTTTCCAAGAGTTAAAGTTGTTCATACTTCTACGACTTTCCGTAATCAGATATATATTCCTGATATTAATTGGATCCTGATGATTCTTTGCATTGCCGTGACAGCTGGGTTCAAAAATCAAAGCCAAATTGGAAATGCTTCTGGGACAGCAGTGATTATAGTGATGTTGGTGACCACATTCCTCATGACTTTAATAATGATATTAGTGTGGCACTCCCACTGGTCTCTAGTTCTTCTCTTCATTTGCTTATCACTCCTTGTGGAGGGTTTCTACCTCTCCTCAGTTATTCAGAAGGTTTATCAAGGTGGGTGGGTCCCCTTGGTTATAGCAACAGCATTTTTCATCATCATGTACATTTGGCATTATGGTACAGCTAAACGTTATGAAATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTAAGGGTGCCTGGGATAGGACTTGTGTACACAGAACTAGCAAGTGGAGTCCCCCACATCTTTTCGCACTTCGTCACAAACTTACCCGCCATTCATTCGGTTGTGGTCTTTGTTTGTTTGAAGTGTTTGCCTGTCCACACAGTCCCAGAAGAAGAAAGATTTCTAGTAAAACGGATTGGACCTAAGAATTTTCGCATGTTTCGGTGTGTGGCTAGATATGGTTACAAAGACCTTCACAAGAAAGATGATGATTTTGAGAAGAAACTCTTTGATAGTATCTTCTTGTTTGTTCGACTCGAGTCATTGATGGATGGTGGATCTTCAGATTCGGACGTGTCTAGCCTACTTGATCAACAGGATGAAACAATTACAGAATATGCATTGAACACCATTAATTCAACTTGCTCAACTGTGGAATCAACAGGCCTACGAACAGCAGATTCGATTGAGCTTGCCAATTCTCCATTGCATCAGAACCAAGCCATCATAACACCTAGTCAAGAAAATGGTCAGACTGAGACAGACGAATTAGAATTCTTGGTTAGCTGTAAAAATGTTGGAGTTGTACACATTCTTGGAAATACAGTAATGAAAGCTAGGAGGGACTCCAGATTATGCAAAAGGATCGCAATTGATTATATATATGCATTTCTTAGGAAGATCTGCAGGGAGAACAGCGTGATGTTCAATGTTCCTCATGAGAGTTTGCTTAATGTTGGCCAAACATTCTATGTATGA 2382 41.35 MASRIKTGEDSDDKDSSIWVLDHQMDQPMEEEASRLRNAHQEKGHSVFKILQLAFQSLGIVYGDLGTSPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLITLIKYVFVVCKANDNGQGGTFALYSLLSRHAKILTIPNHDLSDEKLTTYSRSKYREQSFAAKTKRWLEGHHFKKHAILVLVLVGSCMVIGDGILTPAISVLSAVGGINVGHAKISNDVAVLVAIVILVFLFSMQRYGTDKVGWLFAPVVFLWFTLIGGIGIFNICKYDHSALRAFSPVYIYRYFKRGGKAGWTSLGGIMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYTGQVAYLMKNPDYVIGAFYHSIPESIYWPVFLVATTAAIVASQATISATFSLVKQALALGCFPRVKVVHTSTTFRNQIYIPDINWILMILCIAVTAGFKNQSQIGNASGTAVIIVMLVTTFLMTLIMILVWHSHWSLVLLFICLSLLVEGFYLSSVIQKVYQGGWVPLVIATAFFIIMYIWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELASGVPHIFSHFVTNLPAIHSVVVFVCLKCLPVHTVPEEERFLVKRIGPKNFRMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESLMDGGSSDSDVSSLLDQQDETITEYALNTINSTCSTVESTGLRTADSIELANSPLHQNQAIITPSQENGQTETDELEFLVSCKNVGVVHILGNTVMKARRDSRLCKRIAIDYIYAFLRKICRENSVMFNVPHESLLNVGQTFYV 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4835668 4840097 - CmPI595203_03g010280.1 Cmu03g1028 411814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1028 793 Pfam K+ potassium transporter C-terminal domain 552 790 IPR053952 -
Cmu03g1028 793 NCBIfam potassium uptake protein 53 792 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu03g1028 793 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 792 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu03g1028 793 Pfam K+ potassium transporter integral membrane domain 53 540 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1028 Cmu-Chr3:4835668 Cmu05g1326 Cmu-Chr5:15268686 6.30E-203 dispersed
Cmu03g1028 Cmu-Chr3:4835668 Cmu03g1029 Cmu-Chr3:4845333 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1028 K03549 - csv:101217671 1386.7