Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1073 ATGGGTTCCAAAACACTATTTTTCTTCATCTTCCTTTCCTTTTTGGTCGCTTCTTTCAGGTATGCTTCTGCACAGGATGAGGAAGACAATGGCCTTGTTATGAATTTTTACAAAGATACATGTCCCCAAGCCGAAGATATCATCAAAGAACAAGTTAGGCTTCTCTACAAGCGCCACAAGAACACTGCATTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAATCCTGTGATGCATCTCTGCTGCTGGATTCAACAAGAAGGACCCTGTCTGAGAAGGAAACAGACAGAAGCTTTGGACTCAGGAATTTCAGGTATATTGAGACCATTAAAGAGGCAGTGGAAAGGGAATGCCCTGGAGTTGTGTCCTGTGCTGATATTCTTGTTTTGTCTGCAAGAGATGGTATTGTTTCTCTTGGGGGGCCTTACATCCCACTTAAAACAGGCAGAAGAGATGGAAGGAAAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGACCACAATGAAAGCATGTCTGTTGTCCTTGAAAGATTTGCAGCCATGGGTATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGCGTTGGTAGAACACACTGTGTGAAGCTAGTGCACCGGCTCTACCCACAAGTAGACCCTGTGCTGAACCCTGCCCATGTAGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGATCCCAAGGCTGTACAATACGTGAGGAACGACCGTGGTACACCCATGATTCTGGACAACAATTACTACAGAAACATACTTGACAACAAAGGGTTGCTGATAGTGGATCACCAACTAGCTACAGACAAGAGAACAAAGCCATATGTGAAGAAGATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATACTTTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA 996 44.78 MGSKTLFFFIFLSFLVASFRYASAQDEEDNGLVMNFYKDTCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRKSRADILEEYLPDHNESMSVVLERFAAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPVLNPAHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5231966 5233429 + CmPI595203_03g010730.1 Cmu03g1073 411859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1073 331 Gene3D Peroxidase, domain 2 168 307 - -
Cmu03g1073 331 FunFam Peroxidase 168 307 - -
Cmu03g1073 331 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu03g1073 331 Gene3D - 35 328 - -
Cmu03g1073 331 PANTHER - 16 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 Pfam Peroxidase 49 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g1073 331 FunFam Peroxidase 35 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1073 Cmu-Chr3:5231966 Cmu04g0923 Cmu-Chr4:23697010 2.30E-82 dispersed
Cmu03g1073 Cmu-Chr3:5231966 Cmu10g2762 Cmu-Chr10:34235242 6.30E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1073 K00430 - csv:101214168 644.81