Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1132 ATGATAATGAAATGCTGTATGAATCTTCTTCCTCCTAAACGGGCTTTCTTCTTCATTTCGTTGTTTTTGGTAATTTTTGTTGGTAGCCAATTTAGCGTTGGCCTTGAGAATTCGAATTCTACCATTCAAATCATCAAAGATGGAGATCGGTTGACATCCAGCGACAATAATTTCGTTCTTGGATTCTTCGGTTTCAACAATTCCACCACTCGCCGATATGTCGGAATTTGGTATAATAAAATTCCTCAATTTACCCTCGTTTGGGTTGCAAATAGAAACCAACCCCTTAACGACAACACAGGAACCTTAGCCCTCGACCGCCGTGGAAACCTCCTCCTTTTCACCTCCAAACAAACCATATCTCTTTGGTCTACAAACGCTACCATTCAATCAAACGACGACGTGTTGATTAAGCTTTGGAATACGGGAAATCTCGCCCTGATTGAACGACAAAGCCAAAAGGTTATATGGCAAAGCTTTGACTATCCATCTCATGTCTTTCTTCCCTACATGAAATTGGGGTTGAACTGGCGGACCGGGATTAACTGGTTCCTAACTTCATGGAAGGCGCAGGACGATCCGAGAACTGGGAACTTCAGTTGTCGGATAGACCCAACAGGGTATCCGCAATTAATTTTGTACAAGGGGAATGATCCGCGGTGGCGGATTGGATCATGGACGGGGCACAAATGGTCTGGAGTACCTGAAATGACAAGGTCATTTATATTCAACACAACCTATATCGACAACACAGAGGAGATTTCCATAATGGACAGTGTCACAAACGACACGGTTTTAAGCAGCATGAGTCTAGACGAATCCGGTTTGTTGCATCGGTCCATGTGGAATGAAGAACAACAAAAGTGGAAAGATTATTGGACGGGTCCGACCGAGTGGTGCGACAGCTACAATAGATGCTATCCAAACACTAACTGTGACCAGTACGACACGGAGCAGTTCTATTGCAAGTGCTTGCCTGGCTTCGAACCACGATCGAACCAAAGTTGGTTACGGAGAGATCCGTCGGGTGGGTGCATCATGAAGAGGCCCAACGCCATGTGTCGTAGTGGAGAGGGATTTGTGAGGGTGTCACGTGTGAAGGTCCCGGATACGTCGATGGCACGTGCAGATTTGAGTATGAGTTTGGACGCGTGCGCACAAGCATGTGTAAATGATTGTAACTGTACGGCTTACACGAGCGCAAATGAGGCGACGGGGAGCGGGTGCGTGATGTGGTATGGAGATTTGATAGACACACGGACCTTTGCCAACACGGGTCAAGATCTATATGTAAGAGTTGATGCTATTGAATTAGCTCAATATAATCCACAAAATTCAAATCCTCATCCAACAAAGAAGGTGATAGTAATTGTTGTTGCATCTTTTGTTGCATTGGTGTTACTCGTGACCTCACTAATTTGTTTATGGAAAATGATTAGAAAAAGAAGGGAGAGATCCATGAGTCTATCTAATAACTTTGAGGTCTCTCCAAATTCAAATGAATTTGATGAAAGTAGAACAAATTCAGATTTGCCTATATTTGACTTGTTGACTATAGCAAAGGCAACCGATGATTTTTCATTTAATAACAAGCTTGGAAAAGGTGGCTTTGGCACAGTTTATAAGGGCAAGCTTATGAATGGAGAGGAAATTGCAGTTAAAAGGCTGGCTAAGAATTCAGGGCAAGGAGTTGGAGAGTTCAAGAATGAAGTTACATTAATTGCAAAGCTCCAACATAGAAACCTCGTCAGAATTTTAGGCTATTGCGTTAAGAATGAAGAGAAAATGCTTGTATATGAATACTTACCAAACAAAAGCTTGGACTATTTCATCTTTGATGAAAGCAAGAGGGCTTTGCTCAATTGGAAAAAACGTTTTGAAATTATATGTGGCATCGCACGAGGAATCTTATATCTTCATCAAGATTCAAGGTTGAAAATCATTCATCGAGATTTGAAGGCCAGCAATATACTACTGGATGCTGATTTGAATCCCAAAATCGCAGATTTTGGCATGGCAAGGATAGTTGGCCAAGATCAAATTCAAGCAAACACAAATCGCATCGTGGGAACATATGGTTATATGTCACCAGAGTATGCAATGGAAGGCCTATTTTCAGTAAAATCTGATGTTTATAGCTTTGGAGTTTTGGTGCTAGAGGTGATTACAGGCAAAAAGAACACTGGCTGTATATCCAACTACGTAAATTTGGTTGGACAAGTTTGGGAGCTCTGGAACTTGGACAATGCAATGGAATTAGTGGACTCAAGTTTGGAAGAAGGATCAAGTTGTGAATACGAAATCATGAGATGCCTCCAAATTGGGCTATTGTGTGTTCAAGAGGATCCGACTAACCGTCCGACCATGTCGAATGTGGTTTTCATGTTGGAGAATGAAGTGAGTATTCCTTCTCCAAAGAAACCTGCTTTCATTTTAAAGAGGAAAAGCAACCATGGAGATCCATCCACCAGTACTGAAGGAGCCAACTCCAGTACTACTGAGGGAGCCAACTCTCTAAATGATCTAACAATTTCCATAATCGATGCTCGTTAA 2553 42.11 MIMKCCMNLLPPKRAFFFISLFLVIFVGSQFSVGLENSNSTIQIIKDGDRLTSSDNNFVLGFFGFNNSTTRRYVGIWYNKIPQFTLVWVANRNQPLNDNTGTLALDRRGNLLLFTSKQTISLWSTNATIQSNDDVLIKLWNTGNLALIERQSQKVIWQSFDYPSHVFLPYMKLGLNWRTGINWFLTSWKAQDDPRTGNFSCRIDPTGYPQLILYKGNDPRWRIGSWTGHKWSGVPEMTRSFIFNTTYIDNTEEISIMDSVTNDTVLSSMSLDESGLLHRSMWNEEQQKWKDYWTGPTEWCDSYNRCYPNTNCDQYDTEQFYCKCLPGFEPRSNQSWLRRDPSGGCIMKRPNAMCRSGEGFVRVSRVKVPDTSMARADLSMSLDACAQACVNDCNCTAYTSANEATGSGCVMWYGDLIDTRTFANTGQDLYVRVDAIELAQYNPQNSNPHPTKKVIVIVVASFVALVLLVTSLICLWKMIRKRRERSMSLSNNFEVSPNSNEFDESRTNSDLPIFDLLTIAKATDDFSFNNKLGKGGFGTVYKGKLMNGEEIAVKRLAKNSGQGVGEFKNEVTLIAKLQHRNLVRILGYCVKNEEKMLVYEYLPNKSLDYFIFDESKRALLNWKKRFEIICGIARGILYLHQDSRLKIIHRDLKASNILLDADLNPKIADFGMARIVGQDQIQANTNRIVGTYGYMSPEYAMEGLFSVKSDVYSFGVLVLEVITGKKNTGCISNYVNLVGQVWELWNLDNAMELVDSSLEEGSSCEYEIMRCLQIGLLCVQEDPTNRPTMSNVVFMLENEVSIPSPKKPAFILKRKSNHGDPSTSTEGANSSTTEGANSLNDLTISIIDAR 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5749548 5754050 - CmPI595203_03g011320.1 Cmu03g1132 411918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1132 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 228 IPR036426 -
Cmu03g1132 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 160 - -
Cmu03g1132 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 491 601 - -
Cmu03g1132 850 Gene3D Transferase(Phosphotransferase) domain 1 602 806 - -
Cmu03g1132 850 MobiDBLite consensus disorder prediction 817 836 - -
Cmu03g1132 850 Pfam D-mannose binding lectin 85 189 IPR001480 -
Cmu03g1132 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 803 - -
Cmu03g1132 850 Pfam PAN-like domain 354 419 IPR003609 -
Cmu03g1132 850 MobiDBLite consensus disorder prediction 812 836 - -
Cmu03g1132 850 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524(InterPro)
Cmu03g1132 850 ProSiteProfiles Bulb-type lectin domain profile. 36 160 IPR001480 -
Cmu03g1132 850 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 26 809 - -
Cmu03g1132 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1132 850 Gene3D - 36 160 IPR036426 -
Cmu03g1132 850 SUPERFAMILY Protein kinase-like (PK-like) 500 796 IPR011009 -
Cmu03g1132 850 SMART blect_4 42 163 IPR001480 -
Cmu03g1132 850 ProSiteProfiles Protein kinase domain profile. 526 810 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1132 850 SMART serkin_6 526 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1132 850 CDD STKc_IRAK 532 798 - -
Cmu03g1132 850 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1132 850 ProSiteProfiles PAN/Apple domain profile. 354 434 IPR003609 -
Cmu03g1132 850 CDD B_lectin 43 163 IPR001480 -
Cmu03g1132 850 SMART ntp_6 355 433 IPR003609 -
Cmu03g1132 850 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544(InterPro)
Cmu03g1132 850 Gene3D Phosphorylase Kinase; domain 1 500 601 - -
Cmu03g1132 850 CDD PAN_AP_plant 355 433 - -
Cmu03g1132 850 PIRSF SRK 7 850 IPR024171 GO:0004674(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1132 Cmu-Chr3:5749548 Cmu03g1136 Cmu-Chr3:5790182 3.20E-192 dispersed
Cmu03g1132 Cmu-Chr3:5749548 Cmu03g1133 Cmu-Chr3:5763217 0.00E+00 tandem
Cmu01g2189 Cmu-Chr1:34384853 Cmu03g1132 Cmu-Chr3:5749548 2.60E-178 wgd
Cmu02g0146 Cmu-Chr2:1512682 Cmu03g1132 Cmu-Chr3:5749548 2.10E-116 wgd
Cmu03g1132 Cmu-Chr3:5749548 Cmu05g1559 Cmu-Chr5:24840014 9.90E-186 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75381 PF07714 PK_Tyr_Ser-Thr 9.00E-50 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1132 - - - 0.0