Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1136 ATGAAGCCCTTGATGCCGAAAATGACATCCAACTTCAGGCTCAACCATTTGTCTTTGCTCTGTTTCATACCTCTGTTTCTCCCACACTCAACTGCAGTCGACATCTTAAAATCAGGGCAATCCATTAACGACACCCAAGTAATTGTTTCAGCCGCCGAAAAGTTTGAATTGGGATTCTTCACTCAGCCCAAGTCCTCCAGTTTCAAGTATTTAGGAATCTGGTACAAGAGCCTTCCCGACTACGCCGTTTGGGTGGCAAACAGAGACAACCCAATTCTCAACTCCTCTGCCACTCTAAAATTCAATACAGATGGAAACTTGATTCTCGTCAATCAAACAGGTGAAGTTTTTTGGTCTTCAAATTCAACAAGTTCACTTAAAAATCCAATCGCTCAATTGCTAGATACAGGTAATTTCATTCTGAGAGATTCAAATTCACGATCTGACAATCATGTCTGGCAGAGTTTTGATTACCCCTTTGATACTCTGCTACCGGAAATGAAACTGGGTTGGGACTCCAAAACAGGGCTTAACCGGAAGTTAACATCAAGAAAGAATGAAAACGATCCGTCCTCTGGAGAATTTAGTTATGAAGTCAACACAGATGGGCTTGCTGAACTTGTGGTTCGTAAAGCAAACAAGACGATGTTTAGGGGAGGACCATGGTTTGGCGATGGTTTTACCCGACGTCGATCCACCGGAGGGATTTTCATATATAATTCTTCATATGAGGTATCATTTTCATATAATGCTCCAGACAATAACCCATCAAGAGTTGTGTTGGATGCAAGTGGGTCTGTTGAACACTCTATCTGGAGCGAAGAGGAGAAAGCATGGCGTAAAACATACACGTTTGAAGGATCTGGCTGCAACGACTACGATTTATGTGGAAATTTTGGTCTTTGTAGCTCTGTCTTAGTAGCAAGCTGTGGCTGTTTAGATGGGTTTAAACAGAAATCAACCCAAAATTTTTCAGATGGGTGTGTGAGAAAGGATGAAAAAATTTGTAGAGAAGGAGAAGGATTTAGAAAGATAAGTGATGTGAAATGGCCAGATTCCAGTGGGAAGTCAGTGAAATTGAAAATGGGTATTCAAAATTGCGAAACAGAGTGCTTGAATGATTGTCTTTGCTTGGCTTATGGCAAACTGGAAATTCCTAATATTGGGTCTGCCTGTGTCACCTGGTTTAACAAATTGATTGATATTAGATTTGTTCGTGATGTTGGAACTGGAGATGATCTCTTTGTGAGAGTGGCTGCTTCAGAATTAGAATGGAGTGAGAGGAGGAAGAGTATAATAGTTCCGGTGGTTGTGCCAATCGTGTCAGTGATAATCTTCTTGGCTTTAATCACCCTTTTTATCATTAGGAATGTAAGAAGAAGAGCTAAAGATAATGGAGTTGCAATCACTGAGGATCTAATTCATGAGAATGAACTTGAGATGCCAATTGGGTTAATTGAAGCTGCGACCAACAATTTCTCAATTTCTAATAAGATAGGAGAAGGGGGTTTTGGACCTGTTTATAAGGGCAGACTCCCATGTGGACAAGAAATTGCGGTAAAGAAGCTAGCCGAAAGATCTCGTCAAGGGTTGGAGGAGTTTAAAAATGAGGTCCTTTTCATTTCCCAACTTCAACATCGAAATCTTGTCAAACTTCTTGGTTTCTGCATTCACAAGGAAGAAACATTACTTATTTATGAATACATGCCTAACAAAAGTTTGGACTACTTCCTTTTTGATGACGGAAGACGTTGTTTACTTCATTGGCAAATGAGAATTGATATCATAATTGGCATTGCTCGAGGCCTTCTTTATCTTCATCGAGATTCAAGACTTCGAATTATTCATAGAGATCTCAAAGCTGCCAATATTTTATTAGATAGCGAAATGATGCCAAAAATCTCAGACTTTGGCATTGCACGTATGTTTGGTGAAGGTCAAATGGAAACAAAAACAAATAGAGTTATTGGGACCTACGGTTATATGTCTCCAGAATATGCCATGGAAGGTTTCTTTTCATTCAAATCTGATGTTTATAGCTTTGGAGTTATGGTTTTAGAAATAGTTAGTGGTAAGAGGAACCAAGGTTATTTTATTCACTCGGAACACGAAATGAATCTTCTTGGACACGGCAGTCCCCAATTAATTGTTTCAGCCGCCCAGAAGTTTGAATTGGGTTCTTCACTCAACCCAAAGCCTCGAATTTCAAGTCAAAATGACAAACTACATGCTTCGAATTTGAAAGAAGCCATGGGAGAACTGATTTACAGGTGCAAGCTTTCGGCTTTTCTCTTTGTCTTAACGACCATAGCTCTGTTTCCAACAAAATCATACGGAAATGACAGCATAAAAACAGGGGAATCCATCAATGGAAGTACCCAGATTTTAATTTCATCTGGAGGAAACTTCGTGTTGGGAATTTTCACTCCCCAAGGCTCAAAATTTCAGTATTTGGGAATATGGTTCAACAACATCCCACAAACTATCGTGTGGGTCGCAAACAGAGACAACCCACTTGTAAATTCCTCTGGAAAATTAGAATTCAGAAGAGGAAACATCGTTCTTCTCAACGAAACAGATGGAATTTTATGGTCTTCCACTTCTCCACGATCATCGAAAGAAACAGTAGCTCAGCTGCTAGATACAGGTAATTGGGTCTTAAGAGAATCTGGGTCTGAAGATTATCTATGGCAGAGTTTCGATTACCCCTCCGATACTCTGTTACCTGGGATGAAACTGGGTTGGAACTCCAAAACCGGTCTAAACCGGAAGTTAAGATCGTGGAAAAGCTCAAACGATCCGTCGTTTGGGGACTTCACTTACAGTGTGGATCTTAGTGGGCTTCCCCAATTGGTAACTCGCAAAGGACCCATCCTAAAGTACCGGGGCGGCCCATGGTACGGTAATAGGTTTAGCGGTAGCGCTCCTCTCAGAGATACCGCAGTTTATTCTCCGAAGTTCGAGTATACAGCCGACGAAGTAACTTATTCAATCGTTGCGACGAGTAGTCTCATTGTAAAACTTGCACTGGACGCGGCTGGAATATTGCATCAAGTGTATTGGGACGATGGTAGAAAAGATTGGTATCCTCTGTATACATTGCCAGGGGATCGCTGCGACGACTATGGACTTTGCGGGAATTTTGGTATTTGTACCTTTTCCCTCACTCCACAATGCAATTGCATGGTTGGGTTTGAACCCAAATCGCCTGATGATTGGAAAAGGTTTAGATGGTCAGATGGCTGCGTTAGAAAGGACAATCAAACCTGTAGGAATGGAGAAGGGTTTAAAAGAATCCGCAGTGTGAAATTGCCAGATTCTTCAGGGTATTTGGTGAATATTAATACAAGCATTCATGACTGCGAGGCGGCGTGCTTGAACAACTGCTCTTGCTTGGCTTATGGAATAATGGAACTTTCTACAGGTGGCTATGGCTGTGTCACTTGGTTTCAGAAATTGATTGATGCTAGATTTGTTCCTGAAAATGGACAGGATATCTATGTGAGAGTGGCGGCATCTGAATTAGACTCGAGCAACAGGAAGCTTGTAATTGCTGTTAGTGTGTCTGTGGCTTCACTGATAGCCTTCTTGGTTTTAGTGGTTTGTTTCATCCTGTGGCGTAGAAGGAAAGTTAGAGGCGAAATTCAAAGTCCAGAGAATGAAGTTGAGATGCCACTCTATGATTTTACTACGATTGAGATTGCCACAAATAATTTTTCTTTTTCCAATAAGATAGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGAAAGCTTCCATGTGGGCAAGAAATTGCAGTAAAAAGGTTGGCAGAGGGCTCTGGTCAAGGACAAATCGAGTTCAAAAATGAGGTTTTATTGATTTCCCAACTTCAACATCGAAATCTTGTCAAGCTGCTTGGTTTCTGCATTCATCAAGAACAAACATTACTAGTTTATGAATACATGCCAAACAAAAGTCTAGACTACTTTCTCTTTGATGATGAGGGGCGATCTTTACTCAATTGGCAAAAGAGATTGGACATCATAATTGGAATAGCTCGAGGGCTTCTTTATCTTCACAGAGATTCTAGGCTTAGAATCATACATCGGGATCTTAAAGTGAGTAATATATTATTGGATAATGAAATGAATCCAAAAATTTCAGACTTTGGAATGGCACGAATGTTTCCCGAGGACCAAACTATGACAAAAACCCAAAGAGTTGTTGGGACCTTTGGCTATATGTCTCCTGAATATGCACTCGACGGATGTTTTTCATTGAAATCAGACGTTTTTAGCTTTGGAGTTATTCTTTTGGAAATAGTAAGTGGTAAGAAGAACAGAGGCTTCTTCCATACGGATCATCAACTTAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGGAAATGCTTTGGAATTAGTGGATGAAACATTGGAGGATCAATTCCAACCTCACGAAGCACTGCAATGCATTCAAGTTGGGCTTTTGTGTGTTCAACAGAATCCAGACGAAAGACCAACTATGTGGTCAGTACTTTCAATGTTAGAGAGTGAAAATATGTTATTATCTCCTCCTCAACAACCTGGATTTTACACCGAACGAATGGTTTCGAAGATGGATAAATCGTCGACTGAGATCTCGTCTTCCAGTGAAGTGACCGTTACACTACTACAAGCTCGTTAG 4668 40.77 MKPLMPKMTSNFRLNHLSLLCFIPLFLPHSTAVDILKSGQSINDTQVIVSAAEKFELGFFTQPKSSSFKYLGIWYKSLPDYAVWVANRDNPILNSSATLKFNTDGNLILVNQTGEVFWSSNSTSSLKNPIAQLLDTGNFILRDSNSRSDNHVWQSFDYPFDTLLPEMKLGWDSKTGLNRKLTSRKNENDPSSGEFSYEVNTDGLAELVVRKANKTMFRGGPWFGDGFTRRRSTGGIFIYNSSYEVSFSYNAPDNNPSRVVLDASGSVEHSIWSEEEKAWRKTYTFEGSGCNDYDLCGNFGLCSSVLVASCGCLDGFKQKSTQNFSDGCVRKDEKICREGEGFRKISDVKWPDSSGKSVKLKMGIQNCETECLNDCLCLAYGKLEIPNIGSACVTWFNKLIDIRFVRDVGTGDDLFVRVAASELEWSERRKSIIVPVVVPIVSVIIFLALITLFIIRNVRRRAKDNGVAITEDLIHENELEMPIGLIEAATNNFSISNKIGEGGFGPVYKGRLPCGQEIAVKKLAERSRQGLEEFKNEVLFISQLQHRNLVKLLGFCIHKEETLLIYEYMPNKSLDYFLFDDGRRCLLHWQMRIDIIIGIARGLLYLHRDSRLRIIHRDLKAANILLDSEMMPKISDFGIARMFGEGQMETKTNRVIGTYGYMSPEYAMEGFFSFKSDVYSFGVMVLEIVSGKRNQGYFIHSEHEMNLLGHGSPQLIVSAAQKFELGSSLNPKPRISSQNDKLHASNLKEAMGELIYRCKLSAFLFVLTTIALFPTKSYGNDSIKTGESINGSTQILISSGGNFVLGIFTPQGSKFQYLGIWFNNIPQTIVWVANRDNPLVNSSGKLEFRRGNIVLLNETDGILWSSTSPRSSKETVAQLLDTGNWVLRESGSEDYLWQSFDYPSDTLLPGMKLGWNSKTGLNRKLRSWKSSNDPSFGDFTYSVDLSGLPQLVTRKGPILKYRGGPWYGNRFSGSAPLRDTAVYSPKFEYTADEVTYSIVATSSLIVKLALDAAGILHQVYWDDGRKDWYPLYTLPGDRCDDYGLCGNFGICTFSLTPQCNCMVGFEPKSPDDWKRFRWSDGCVRKDNQTCRNGEGFKRIRSVKLPDSSGYLVNINTSIHDCEAACLNNCSCLAYGIMELSTGGYGCVTWFQKLIDARFVPENGQDIYVRVAASELDSSNRKLVIAVSVSVASLIAFLVLVVCFILWRRRKVRGEIQSPENEVEMPLYDFTTIEIATNNFSFSNKIGEGGFGPVYKGKLPCGQEIAVKRLAEGSGQGQIEFKNEVLLISQLQHRNLVKLLGFCIHQEQTLLVYEYMPNKSLDYFLFDDEGRSLLNWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKVSNILLDNEMNPKISDFGMARMFPEDQTMTKTQRVVGTFGYMSPEYALDGCFSLKSDVFSFGVILLEIVSGKKNRGFFHTDHQLNLLGHAWKLWDEGNALELVDETLEDQFQPHEALQCIQVGLLCVQQNPDERPTMWSVLSMLESENMLLSPPQQPGFYTERMVSKMDKSSTEISSSSEVTVTLLQAR 1555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5790182 5801595 - CmPI595203_03g011360.1 Cmu03g1136 411922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1136 1555 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 190 IPR036426 -
Cmu03g1136 1555 CDD STKc_IRAK 1245 1511 - -
Cmu03g1136 1555 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1315 1518 - -
Cmu03g1136 1555 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 772 1524 - -
Cmu03g1136 1555 Gene3D Phosphorylase Kinase; domain 1 1205 1314 - -
Cmu03g1136 1555 Gene3D Phosphorylase Kinase; domain 1 455 568 - -
Cmu03g1136 1555 CDD PAN_AP_plant 1087 1171 - -
Cmu03g1136 1555 ProSiteProfiles Protein kinase domain profile. 493 746 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1136 1555 SMART ntp_6 337 418 IPR003609 -
Cmu03g1136 1555 SMART ntp_6 1091 1170 IPR003609 -
Cmu03g1136 1555 Pfam PAN-like domain 1090 1155 IPR003609 -
Cmu03g1136 1555 Pfam PAN-like domain 336 402 IPR003609 -
Cmu03g1136 1555 SUPERFAMILY alpha-D-mannose-specific plant lectins 829 934 IPR036426 -
Cmu03g1136 1555 ProSiteProfiles PAN/Apple domain profile. 1090 1171 IPR003609 -
Cmu03g1136 1555 Pfam D-mannose binding lectin 83 185 IPR001480 -
Cmu03g1136 1555 Pfam D-mannose binding lectin 828 929 IPR001480 -
Cmu03g1136 1555 ProSiteProfiles Bulb-type lectin domain profile. 780 900 IPR001480 -
Cmu03g1136 1555 SMART egf_5 289 329 IPR000742 -
Cmu03g1136 1555 SMART egf_5 1038 1083 IPR000742 -
Cmu03g1136 1555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1360 1372 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1136 1555 SMART serkin_6 493 746 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1136 1555 SMART serkin_6 1239 1510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1136 1555 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1206 1314 - -
Cmu03g1136 1555 ProSiteProfiles Protein kinase domain profile. 1239 1517 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1136 1555 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Cmu03g1136 1555 Gene3D Transferase(Phosphotransferase) domain 1 1315 1518 - -
Cmu03g1136 1555 Gene3D Transferase(Phosphotransferase) domain 1 569 758 - -
Cmu03g1136 1555 Pfam S-locus glycoprotein domain 217 319 IPR000858 GO:0048544(InterPro)
Cmu03g1136 1555 Pfam S-locus glycoprotein domain 961 1069 IPR000858 GO:0048544(InterPro)
Cmu03g1136 1555 CDD B_lectin 40 159 IPR001480 -
Cmu03g1136 1555 ProSiteProfiles EGF-like domain profile. 1035 1071 IPR000742 -
Cmu03g1136 1555 CDD B_lectin 789 903 IPR001480 -
Cmu03g1136 1555 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Cmu03g1136 1555 SMART blect_4 787 903 IPR001480 -
Cmu03g1136 1555 SMART blect_4 39 159 IPR001480 -
Cmu03g1136 1555 FunFam Os04g0303100 protein 78 216 - -
Cmu03g1136 1555 FunFam Cysteine-rich receptor-like protein kinase 10 457 568 - -
Cmu03g1136 1555 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 728 - -
Cmu03g1136 1555 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 156 - -
Cmu03g1136 1555 SUPERFAMILY Protein kinase-like (PK-like) 1222 1537 IPR011009 -
Cmu03g1136 1555 FunFam Os04g0303100 protein 821 960 - -
Cmu03g1136 1555 Gene3D - 776 900 IPR036426 -
Cmu03g1136 1555 Gene3D - 29 156 IPR036426 -
Cmu03g1136 1555 SUPERFAMILY Protein kinase-like (PK-like) 481 700 IPR011009 -
Cmu03g1136 1555 CDD PAN_AP_plant 336 419 - -
Cmu03g1136 1555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1136 1555 Pfam Protein tyrosine and serine/threonine kinase 1240 1509 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1136 1555 Pfam Protein tyrosine and serine/threonine kinase 495 693 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1132 Cmu-Chr3:5749548 Cmu03g1136 Cmu-Chr3:5790182 3.20E-192 dispersed
Cmu03g1133 Cmu-Chr3:5763217 Cmu03g1136 Cmu-Chr3:5790182 1.10E-192 dispersed
Cmu03g1134 Cmu-Chr3:5775774 Cmu03g1136 Cmu-Chr3:5790182 0.00E+00 dispersed
Cmu03g1136 Cmu-Chr3:5790182 Cmu03g1139 Cmu-Chr3:5822783 9.00E-286 dispersed
Cmu10g2475 Cmu-Chr10:31363250 Cmu03g1136 Cmu-Chr3:5790182 1.60E-62 dispersed
Cmu03g1135 Cmu-Chr3:5783221 Cmu03g1136 Cmu-Chr3:5790182 0.00E+00 tandem
Cmu03g1136 Cmu-Chr3:5790182 Cmu03g1137 Cmu-Chr3:5807839 2.70E-181 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75385 PF07714 PK_Tyr_Ser-Thr 1.10E-48 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1136 - - - 0.0