Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1141 ATGAAACCTAAAAACAACTACGCCTCTTCATATCCTACTCCACTTCTTCTTCTTCTTTCATTTACTTTCTTCTCTCCAACATTTTGCTTTGGCAAAGATGCAATCACATCAGAAAATTTCATCAAAGACCCTGCTTCTGTTACTTCCAATGCCAGTTCCTTCCAGTTGGGCTTCTTCACACCTCCTAATTCCACCACCCGATATGTCGGAATTTGGTACAACCAAATTTCCTTACAAACCATAGTCTGGGTGGCCAACAAAGACAATCCCCTCAAAGATTCTTCTGGGATTTTCACTATTTCTAAACAGGGACATCTCGTCGTCTTAGATGGAAACCACACCGTCCTCTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCAACCAACACAATCGCTCGAATTTTAGATTCAGGTAACCTTGTTTTGGAAGATACCGCTTCTGGGAACATCATATGGGTGAGTTTTCAACACCCTTCTAATAAATTCTTGACTTCCATGAAACTGATCACGAACACAAGAACAAAAGAGAAGATGCAGCTTACCTCATGGAGCACCCCAGTTAATCCATCCACTGGAAACTTTTCCTTAGCACTAGAAGTTCTGACAATTCCTGAAGCTGTGATTTGGTCTAATGGTGGAAAGCTTTATTGGCGATCTGGTCCATGGAACGGTCAGTCTTTTATCGGAATACCCGAAATGAACGCTGTTTATCTTTCTGGGTTTAACCTTGTAATTCAAGATCAAGAATACACGTTATCCGTTCCTTATAATTACACTATTCAAGAATTCGCTTATTTGTTTTTAACTTCGAGAGGGAATTTGGTGCAAACGTATTGGAATCCTCAAGTGAGGAATTGGGATGTTATTTGGTTTGCTATAAAAACAGAGTGTGATTTCTATGGAACTTGTGGGGCGTTTGGGATTTGTAATCCAAAGGCATCTCCTAATTGCAGTTGTTTAAAAGGGTTTAAGCCAAAGAATGAAGAGGAATGGAATCAAGGAAATTGGAGTGGTGGGTGTGTGAGAAGGACGCCATTGCAATGCATTAATGGCAGTTCTGAAGAAGATGGATTTCTAACAGTTGAAATGGTTAAATTGCCATATTTTGTAGAGTGGTCCATTTTCGCCGTTACAGAAGATAATTGCAAACAAGAGTGCTTGAGCAATTGTTCGTGTAATGCTTATGCATTTGAAAATGGTATTCGGTGTATGCTATGGAGAAGGGATGACTTAATTGATATACAAAAATTTGAGACTGGTGGGGCTTCTCTTTACCTTCGGTTGCCATATGCAGAATTAGATCATAATAATAATGTAAAAGATAAGAAAGGGATTATTATAGCAATTGTGCTACCAGTGACCTTTATCATCATGATCACCATCACCATATCATTTTGGTTGAAAAGGAAGACTCACAAAAAGAAAAAAACATCTGAAGAAATAGAAAGGACTTTGAAATTGACAAGGGAGGATGATATGATTGAGAATGGTATCAAACTTGAAGATCTACCTCTTTATGACTTTGAGCAGCTTGTAATTGCAACAAACAATTTTGATATAAATAACAAACTTGGGCAAGGTGGGTTTGGTCCTGTATATAAGGGAAAATTGTTAAATGGACAAGAAATAGCAGTAAAAAGGCTTTCAAGAGCCTCCAATCAAGGGCATGAAGAATTTATAAATGAAGTGAGAGTGATTTCTAAACTACAACATAGAAATCTTGTAAGGCTCTTTGGTTGTTGCATGGAAGGAGAAGAGAAAATGTTGATATATGAGTACATGCCTCGCCTAAGTTTGGATGCTTTAATCTTTGGCTCTTCCCAACCAGAACTTTTGGACTGGAGGCAGAGATTTAACATTATTGATGGAATTGCTCGAGGTCTTCTTTATCTTCATAGAGACTCAAGATTGAAAATCATTCATAGAGATCTCAAAGCAAGTAATATTTTGTTAGACCAAGATTTGAACCCTAAAATTTCTGACTTTGGCATGGCAAGGATTTTTTGTGGCAATGAAGTCCAAGCGAACACTTTAAGAGTTGTCGGAACTTATGGGTATATGTCTCCTGAATATGCAATGCAAGGTCGATTTTCAGAGAAATCAGGTGTATTTAGTTTTGGCGTTCTGTTGCTTGAAATTATCAGTGGGAGACGAAATACAGAATTTTACTACCATGAACAAGCTATTATTGGGATTTTGGTGAAGAAGATGGGTTTGTATAGAGTGGAAATGGTTAAAGTAGCGTATTTTGTAGAGTGGTCTACTTTATCTTTTACTTCAAGTGATTGCAAACAAGAGTGTTTGAACAATTGTTCTTGTAATGCTTATGCTTATGAAGATGGAATTCGGTGTATGCTTTGGAGAAGGGATGAGTTAATTGATCTTCAAAAGTTTGAGAGTGGTGGAGCTTCTCTTTACCTTCATCAGAAAAAGTCAACTTTGATGTCAAACGAAAAGGAGAAAACGATATTGAAACTGACAAGGGAGGATGATGTGATAATTGAGGATGGCATCACACTTGAAGAGCTACCTCTTTATGATTTTGAGAAGCTTGTAATTGCAACCAACAATTTTGATATAGATAACAAACTTGGGCAAGGTGGCTTTGGTCCAGTGTACAAGCGAAATCGTAGATCTTCCTCTCCAAAACAATCTGGCTTTGTTGGTAGAGCATATGAAAGTAACACAAATTCATCTCAACAAAATTTAGATAAATATTCGGTAAACAATGTTACACTCACCACAATTACACCTGGATAG 2769 37.52 MKPKNNYASSYPTPLLLLLSFTFFSPTFCFGKDAITSENFIKDPASVTSNASSFQLGFFTPPNSTTRYVGIWYNQISLQTIVWVANKDNPLKDSSGIFTISKQGHLVVLDGNHTVLWSSNVSSSSSSSSSTNTIARILDSGNLVLEDTASGNIIWVSFQHPSNKFLTSMKLITNTRTKEKMQLTSWSTPVNPSTGNFSLALEVLTIPEAVIWSNGGKLYWRSGPWNGQSFIGIPEMNAVYLSGFNLVIQDQEYTLSVPYNYTIQEFAYLFLTSRGNLVQTYWNPQVRNWDVIWFAIKTECDFYGTCGAFGICNPKASPNCSCLKGFKPKNEEEWNQGNWSGGCVRRTPLQCINGSSEEDGFLTVEMVKLPYFVEWSIFAVTEDNCKQECLSNCSCNAYAFENGIRCMLWRRDDLIDIQKFETGGASLYLRLPYAELDHNNNVKDKKGIIIAIVLPVTFIIMITITISFWLKRKTHKKKKTSEEIERTLKLTREDDMIENGIKLEDLPLYDFEQLVIATNNFDINNKLGQGGFGPVYKGKLLNGQEIAVKRLSRASNQGHEEFINEVRVISKLQHRNLVRLFGCCMEGEEKMLIYEYMPRLSLDALIFGSSQPELLDWRQRFNIIDGIARGLLYLHRDSRLKIIHRDLKASNILLDQDLNPKISDFGMARIFCGNEVQANTLRVVGTYGYMSPEYAMQGRFSEKSGVFSFGVLLLEIISGRRNTEFYYHEQAIIGILVKKMGLYRVEMVKVAYFVEWSTLSFTSSDCKQECLNNCSCNAYAYEDGIRCMLWRRDELIDLQKFESGGASLYLHQKKSTLMSNEKEKTILKLTREDDVIIEDGITLEELPLYDFEKLVIATNNFDIDNKLGQGGFGPVYKRNRRSSSPKQSGFVGRAYESNTNSSQQNLDKYSVNNVTLTTITPG 922
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5852562 5861679 + CmPI595203_03g011410.1 Cmu03g1141 411927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1141 922 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 597 688 - -
Cmu03g1141 922 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 158 - -
Cmu03g1141 922 MobiDBLite consensus disorder prediction 880 905 - -
Cmu03g1141 922 SMART ntp_6 356 431 IPR003609 -
Cmu03g1141 922 SMART ntp_6 737 812 IPR003609 -
Cmu03g1141 922 ProSiteProfiles PAN/Apple domain profile. 737 813 IPR003609 -
Cmu03g1141 922 CDD PAN_AP_plant 740 810 - -
Cmu03g1141 922 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 226 IPR036426 -
Cmu03g1141 922 Gene3D Transferase(Phosphotransferase) domain 1 597 777 - -
Cmu03g1141 922 SUPERFAMILY Protein kinase-like (PK-like) 846 883 IPR011009 -
Cmu03g1141 922 Pfam PAN-like domain 351 416 IPR003609 -
Cmu03g1141 922 Pfam PAN-like domain 741 793 IPR003609 -
Cmu03g1141 922 Pfam D-mannose binding lectin 80 186 IPR001480 -
Cmu03g1141 922 ProSiteProfiles Protein kinase domain profile. 521 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1141 922 SMART blect_4 38 161 IPR001480 -
Cmu03g1141 922 MobiDBLite consensus disorder prediction 874 905 - -
Cmu03g1141 922 ProSiteProfiles PAN/Apple domain profile. 351 432 IPR003609 -
Cmu03g1141 922 SMART serkin_6 521 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1141 922 CDD PAN_AP_plant 347 432 - -
Cmu03g1141 922 SUPERFAMILY Protein kinase-like (PK-like) 504 744 IPR011009 -
Cmu03g1141 922 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 485 596 - -
Cmu03g1141 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1141 922 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 26 734 - -
Cmu03g1141 922 Gene3D Phosphorylase Kinase; domain 1 842 918 - -
Cmu03g1141 922 Pfam S-locus glycoprotein domain 220 330 IPR000858 GO:0048544(InterPro)
Cmu03g1141 922 Pfam Protein tyrosine and serine/threonine kinase 523 723 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1141 922 Gene3D Phosphorylase Kinase; domain 1 480 596 - -
Cmu03g1141 922 ProSiteProfiles Bulb-type lectin domain profile. 32 158 IPR001480 -
Cmu03g1141 922 CDD B_lectin 39 161 IPR001480 -
Cmu03g1141 922 Gene3D - 30 159 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1139 Cmu-Chr3:5822783 Cmu03g1141 Cmu-Chr3:5852562 2.10E-18 dispersed
Cmu03g1141 Cmu-Chr3:5852562 Cmu10g1427 Cmu-Chr10:8419970 2.50E-158 dispersed
Cmu03g1140 Cmu-Chr3:5840411 Cmu03g1141 Cmu-Chr3:5852562 1.80E-296 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75390 PF07714 PK_Tyr_Ser-Thr 1.80E-44 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1141 - - - 0.0