Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu03g1239 | ATGTTGGAACACCTCGCCCGAGAATCAGACGGGGAGCTTGGTTACGAAGCAGCTGTTAATTCAAATTCCAGTCAAAATTCTATGAGCAGTGAGAGTTGTAGTAGTTTCAGTCGTCTCTCCTTTGATGCTGCCATTGATTTACCTACCTCTCGATCTTCGCCGGAGAGTCTTGATTTGAAGCCTCATCGATCGTCTGATTTCGCTTACTCCGCTATTCGTCGACGGAAATCTAAGCTTACCTTTCGTGATTTTCGACTTCTCCGTCGGATTGGTGCTGGCGACATTGGGACTGTTTATTTATGTCAGCTGAGGAAGCTGAGCGAGGGGTGTTATGAGGAGGAAGATGATGATCCGTGTTTGTATGCGATGAAAGTTGTGGATAAAGAAGCGTTGGAATTGAAGAAGAAAGTGCAGAGGGCGGAAATGGAGAGGAGAATATTGAAGATGCTGGATCATCCGTTTTTGCCTACACTCTACGCTGAGTTTGAGGCTTCTCATTTTTCTTGTATTGTTATGGAGTTCTGTTCCGGCGGCGATTTGCATTCTCTCCGCCATAAACAGCCGCGGAAACGCTTCTCTCTCACTTCCGCGAGGTTTTATGCAGCTGAAGTTCTTGTTGCTTTAGAGTACCTTCATATGCTTGGAATCATTTACAGAGACCTTAAACCGGAGAATGTTCTCGTCCGATCAGACGGTCACATTATGTTATCGGATTTCGATTTATCTCTCTGCTCCGACGCCACCCCTGCCGTTGAATCACCCAACTCCTCCCCTACCACGGCGTTTCCCGACGCAACGGCCTACCCCAGAACCAACGCTGCCGTTTCCGCCGCCTCCACAACTCCTTTTTCCTGCCTCTACAACCGTCTTTTCCGGTCGCGCAAGGTCCAAACTCTGACCCCCAACTGGCTCTTTGTCGCAGAGCCCGTTTCCGCTCGGTCCTGCTCTTTCGTCGGTACCCACGAGTACGTCTCGCCGGAAGTTGCCGCCGGCGGGTCCCACGGTAACGCCGTTGACTGGTGGGCCTTTGGAATATTTCTCTACGAGTTGATCTACGGCCGCACGCCGTTTGCGGCTTCGTCCAACGAGACGACGCTAAGGAACATTATAAAGAAGCCGTTGACGTTTCCGACTGCGGTGCCGTCTGGCGCGCTTGAGCACCACGCGCGGGACCTCATATCCGGATTGCTTAACAAGGATCCGACCCGGAGACTTGGGTCGAAACGCGGGTCCGCCGACATCAAGAAGCATCCGTTCTTCAAGGGGCTCAACTTCGCCTTAATTCGGTCGCTCACTCCGCCGGAAATTCCCGGCGTACGACGGCGGAAGCAGACTCCCGTTCCGGCGGCCAAGAGCAAGGACAAGCCGGGTCAGTCAGCCGGGTTCGATTACTTCTGA | 1398 | 52.5 | MLEHLARESDGELGYEAAVNSNSSQNSMSSESCSSFSRLSFDAAIDLPTSRSSPESLDLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRKLSEGCYEEEDDDPCLYAMKVVDKEALELKKKVQRAEMERRILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPNSSPTTAFPDATAYPRTNAAVSAASTTPFSCLYNRLFRSRKVQTLTPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGIFLYELIYGRTPFAASSNETTLRNIIKKPLTFPTAVPSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEIPGVRRRKQTPVPAAKSKDKPGQSAGFDYF | 465 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7185350 | 7187342 | + | CmPI595203_03g012390.1 | Cmu03g1239 | 412025 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu03g1239 | 465 | MobiDBLite | consensus disorder prediction | 436 | 465 | - | - | |
Cmu03g1239 | 465 | FunFam | serine/threonine-protein kinase D6PK-like | 312 | 438 | - | - | |
Cmu03g1239 | 465 | SMART | serkin_6 | 84 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu03g1239 | 465 | Pfam | Protein kinase domain | 85 | 245 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu03g1239 | 465 | Pfam | Protein kinase domain | 314 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu03g1239 | 465 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 436 | IPR011009 | - | |
Cmu03g1239 | 465 | Gene3D | Transferase(Phosphotransferase) domain 1 | 175 | 242 | - | - | |
Cmu03g1239 | 465 | CDD | STKc_phototropin_like | 82 | 443 | - | - | |
Cmu03g1239 | 465 | PANTHER | FLIPPASE KINASE 1-RELATED | 30 | 443 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cmu03g1239 | 465 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 216 | 228 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu03g1239 | 465 | ProSiteProfiles | Protein kinase domain profile. | 84 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu03g1239 | 465 | FunFam | protein kinase PINOID | 175 | 243 | - | - | |
Cmu03g1239 | 465 | Coils | Coil | 123 | 150 | - | - | |
Cmu03g1239 | 465 | Gene3D | Transferase(Phosphotransferase) domain 1 | 313 | 438 | - | - | |
Cmu03g1239 | 465 | FunFam | protein kinase PINOID 2 | 82 | 174 | - | - | |
Cmu03g1239 | 465 | Gene3D | Phosphorylase Kinase; domain 1 | 82 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g1239 | Cmu-Chr3:7185350 | Cmu11g0276 | Cmu-Chr11:3292389 | 7.70E-108 | dispersed | |
Cmu03g1239 | Cmu-Chr3:7185350 | Cmu02g2184 | Cmu-Chr2:35479174 | 5.70E-103 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75394 | PF00069 | Pkinase | 1.10E-31 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu03g1239 | - | - | - | 0.0 |