Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1291 ATGGCGGCCTCAACAATGGCTCTGTCCTCACCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCCCCCCTGAGCTTCTCGGCAATGGCAGAGTCAGTATGAGGAAATCCGTTGCCAAGCCTGTTTCTTCTGGAAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGGCCATTCTCCGGCGAGCCTCCGTCCTACCTCATCGGAGATTCACCGGTGACTACGGTTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTCTAGGTGGGCCATGCTCGGAGCGTTGGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAGCGGCGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCACGGGGGCCGTCGAGGGATACCGTATCGCCGGTGGCCCACTTGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA 723 56.85 MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGPFSGEPPSYLIGDSPVTTVGILPDFPQTLRPSPRTVSLKSSTLGGPCSERWAACSRSFFPAAAEPELDPRPKHSSHLGLSGGSHGGRRGIPYRRWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7983741 7985956 + CmPI595203_03g012910.1 Cmu03g1291 412077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1291 240 Pfam Chlorophyll A-B binding protein 159 207 IPR022796 -
Cmu03g1291 240 Gene3D Chlorophyll a/b binding protein domain 138 237 - -
Cmu03g1291 240 MobiDBLite consensus disorder prediction 1 31 - -
Cmu03g1291 240 MobiDBLite consensus disorder prediction 124 144 - -
Cmu03g1291 240 SUPERFAMILY Chlorophyll a-b binding protein 153 237 - -
Cmu03g1291 240 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 74 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1291 Cmu-Chr3:7983741 Cmu10g1951 Cmu-Chr10:25095395 1.50E-62 dispersed
Cmu03g1291 Cmu-Chr3:7983741 Cmu01g2379 Cmu-Chr1:35827536 4.40E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1291 K08912 - rcu:8289767 281.182