Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1334 ATGACTTCGGGTTCCAGAATGCCCACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGGCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGGTCTCGTAATTGGACTCCTGCACAAAGCGGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTATAGATGTTCCTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCGTTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA 984 51.83 MTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRASYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDHTIDVPMMDGTAAEFAFGSCSVGIVKPWEGERIHEECISDDLELTLGNSSTR 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8442914 8445467 - CmPI595203_03g013340.1 Cmu03g1334 412120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1334 327 MobiDBLite consensus disorder prediction 84 124 - -
Cmu03g1334 327 MobiDBLite consensus disorder prediction 1 21 - -
Cmu03g1334 327 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 327 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cmu03g1334 327 MobiDBLite consensus disorder prediction 165 184 - -
Cmu03g1334 327 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 141 IPR008540 -
Cmu03g1334 327 MobiDBLite consensus disorder prediction 86 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1334 Cmu-Chr3:8442914 Cmu07g1007 Cmu-Chr7:24814404 2.70E-123 dispersed
Cmu03g1334 Cmu-Chr3:8442914 Cmu01g1863 Cmu-Chr1:32215237 1.20E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5905 PF05687 BES1_N 2.80E-66 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1334 - - - 0.0