Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1490 ATGGGTTCTTTGCCTTCCGAAGCTTTGGCCGTCGAAATTACCGACACCCATATTCATACCGTCGCCGGTGCCGGCGCAGAAACCTCTGAATGGCTTCTCAATTCCCCCAACCCTCCAACTTTGTGGGAAGAAATTGTGGACGCCATCAAAGGAAATGCAGTTCCTCGAAGTTGCACAAAGAACCCCAACAAAAACACTTCTTCTTCTTCAAGCTCTGGAAAACAGAGCATTTTCAAAACGATACTTTCCCTTCTGCAGAGAGTGTTCCCGATCCTTAAATTGCCTCGAAATTACAAAGCCTCCAAGTTCAAAAACGACCTCATGGCTGGTTTAACACTCGCCAGTCTCAGCATCCCTCAGAGTATTGGGTATGCTAACTTGGCAAAGCTTGATCCTCAGTTCGGTCTCTATACAAGTGTTGTTCCTCCTTTGATTTATGCATTTATGGGGAGTTCGAGAGAGATAGCGATTGGACCGGTGGCTGTGGTTTCATTGCTTCTTTCGTCTATGCTTCAAGAAATTCAAGATCCTGTTGCAGACTCAGTTGCTTATAGAAGGCTTGTTTTCACTGTAACTTTATTTGCAGGGATTTTCCAAGCATCATTTGGACTCTTGAGACTGGGTTTTCTTGTGGACTTCCTATCTCATGCTGCCATTGTTGGGTTCATGGCTGGGGCTGCCATTCTCATTGGTCTTCAACAAATGAAAGGCTTACTTGCCATCAGCAACTTCACCGCTAAAACTGATGTGGTTTCTGTTTTGGAGTCTGTGGTGAAATCTGTTCACCAGACTTGGTACCCTTTGAACATTGTACTTGGCTGCTCTTTCCTAATCTTTCTCCTTGTAGCCAGGTTCATAGGCAGAAGGAAGAAGAAGCTATTTTGGGTGTCAGCCATTGCTCCTCTCATATCAGTTATTCTCTCCACTTTGATAGTGTTTGTTTCAAGAGCTGACAAACATGGAGTTAAGATAGTGAAGGAAGTGAAAAAAGGACTGAACCCAATCTCCATTCATCAGCTTCAATTGAACAGCTCAACTGTTGGGTTAGCTGCAAAAGCTGGCCTCATTGCTGCTCTTATAGCTCTCACAGAAGCCATCGCGGTGGGCCGATCGTTCGCCTCGATTAAAGGCTACAGCATTGATGGGAACAAGGAGATGATAGCCATGGGATTGATGAACATAATAGGCTCTTTAACATCTTGTTACATAGCGACTGGGTCATTCTCAAGAACTGCTGTGAATTATAGTGCTGGGTGTGAAAGTGTATTGTCAAATATAGTGATGGCAATAACAGTGATGGTGACACTGCAATTTATGACTCGGTTTCTTTACTTTACTCCAATGGCCATTTTGGCTTCAATCATTCTCTCAGCTCTTCCTGGTCTCATTGACATTAATGAAGCTTTGCATATTTGGAAGGTTGATAAGCTTGACTTTCTTGCCTGTCTTGGCGCTTTCCTTGGTGTCTTGTTTCATTCGGTCGAATTTGGCCTTCTTGTAGCGGTTGGAATTTCATTTGCAAAAATATTGTTGATTTCAGTAAGACCAGCCACAGAAGAGGTGGGAAGGCTTCCAAGAAGTGAGATGTTTTGCAACATGAAGCAATTCCCCATGGCCACCAAAACTCAAGGACTCTCCATTATCAGAATTAACTCTGCCTTGCTTTGTTTTGCCAATGCTAGTTTCATTAGAGACAGGATAATGAGATTGGTGGAAGATGATAATGATGATGATATTGAAGAAAAAACAGCAAAAGATCAACCTAAACAAGTAGTTGTTGACATGTGCAATGTTTTGAATATCGATACATCAGGAATCATTGCTTTAGAGGAACTTCACAAAAGGTTGTTGTTGCACGGCATTCAACTAACAATAGCCAGTCCAAAATGGGAAGTGATCCACAAACTAAAAAAGACAAACTTTGTTGAAAGAATTGAAGGAAGGGTTTTCCTATCAGTTGGTGAAGCTGTGGATTCCTGCCTTGGAAATGCTTCCAAATTGCCTTCTCCCTTACCAAAGTCATTGTGA 2028 42.6 MGSLPSEALAVEITDTHIHTVAGAGAETSEWLLNSPNPPTLWEEIVDAIKGNAVPRSCTKNPNKNTSSSSSSGKQSIFKTILSLLQRVFPILKLPRNYKASKFKNDLMAGLTLASLSIPQSIGYANLAKLDPQFGLYTSVVPPLIYAFMGSSREIAIGPVAVVSLLLSSMLQEIQDPVADSVAYRRLVFTVTLFAGIFQASFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQMKGLLAISNFTAKTDVVSVLESVVKSVHQTWYPLNIVLGCSFLIFLLVARFIGRRKKKLFWVSAIAPLISVILSTLIVFVSRADKHGVKIVKEVKKGLNPISIHQLQLNSSTVGLAAKAGLIAALIALTEAIAVGRSFASIKGYSIDGNKEMIAMGLMNIIGSLTSCYIATGSFSRTAVNYSAGCESVLSNIVMAITVMVTLQFMTRFLYFTPMAILASIILSALPGLIDINEALHIWKVDKLDFLACLGAFLGVLFHSVEFGLLVAVGISFAKILLISVRPATEEVGRLPRSEMFCNMKQFPMATKTQGLSIIRINSALLCFANASFIRDRIMRLVEDDNDDDIEEKTAKDQPKQVVVDMCNVLNIDTSGIIALEELHKRLLLHGIQLTIASPKWEVIHKLKKTNFVERIEGRVFLSVGEAVDSCLGNASKLPSPLPKSL 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11229215 11235400 - CmPI595203_03g014900.1 Cmu03g1490 412276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1490 675 SUPERFAMILY SpoIIaa-like 542 660 IPR036513 -
Cmu03g1490 675 CDD STAS_SulP_like_sulfate_transporter 536 651 - -
Cmu03g1490 675 Pfam STAS domain 537 656 IPR002645 -
Cmu03g1490 675 PANTHER SULFATE TRANSPORTER 74 661 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu03g1490 675 MobiDBLite consensus disorder prediction 56 73 - -
Cmu03g1490 675 NCBIfam sulfate permease 90 653 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu03g1490 675 ProSitePatterns SLC26A transporters signature. 132 153 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cmu03g1490 675 ProSiteProfiles STAS domain profile. 555 660 IPR002645 -
Cmu03g1490 675 Gene3D STAS domain 515 662 IPR036513 -
Cmu03g1490 675 Pfam Sulfate permease family 103 483 IPR011547 GO:0016020(InterPro)
Cmu03g1490 675 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1490 Cmu-Chr3:11229215 Cmu09g1503 Cmu-Chr9:27550222 9.90E-165 dispersed
Cmu03g1490 Cmu-Chr3:11229215 Cmu03g1491 Cmu-Chr3:11271023 2.30E-169 tandem
Cmu07g0944 Cmu-Chr7:23719862 Cmu03g1490 Cmu-Chr3:11229215 3.50E-223 transposed
Cmu11g1533 Cmu-Chr11:27641386 Cmu03g1490 Cmu-Chr3:11229215 1.80E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1490 K17469 - csv:101211892 1114.37