Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1512 ATGAATGTCTTCCCACAACGGCCTCACTATGTAATCAAAGGTTGGAGGTTGGTCCCGAGTGCCTTGTTTGTAGGAGGAAAGAAGAATCATCATCTCAATGATATGGAATTGGTCAAAGCTTGTATCATTGCCTGGGCAATCTGGGATAATAGAAATAAGTTTATGCACTTAAAGATAATTCAGTTGGTTATAGGTCGTTATGAGTGGATCCTTGATTATGCAGTAGAAGTTGGGGCTTTGCCTAAAGAGCTTAGCAATGTTGAAATTGTTTATTTTCCTTCATATGACATAAACAGTCACAATATGCATATCCTTCATGTTGATGCAGCTTGTGTGCAAAATACATTAGAAATTGGCTACATGGATGCCTCGTCAAAATTTGGAGCGTTGGGATGCTTGTTAACAGTGATGCTATTGCATTATAGTACTGTGAAGCTTGACATGGCTTGGCCAAAGTTTTTTTCTCCTAGGAAGAAAGGAAAACCCATGGATCCGAGGAAAATCGCTGGGAAACCCAAGCTTGGCCGACTTAATGCGGCCAAGAACATTGACTATGATGCTACTTCCTCGTCTTCTTCGCTTGAAGATTCTTCTGGGTCTCTCTATACTCGCTCCATGGAGACCCCCGATCCCTCCAGTTTTCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACTTTAGGGCTAGATGGCCCTGACGACTTTGCTATTCCGATGGAGGCATGGGAGGCTAGAAAGGTTCGTTCATCTTCCGAGCTTCTACCGAGGTCGAGGCTGTATCCCATGGACACCTCCCCGAAGACCGAGGAGATTAGTAAGGATAAGGAAGATAAAGAAATGGAAGATGAATTGTGCCGGAGAGTTAAGGATTCAGTTCGAATTAGCGTCGAGCTGTCCACGCCTAAGTCGGAATTTCCAGAGTTGAATGAACGCCGGATGGCTACTGCTACTGGATGTAGTTCGAGAAGTGGAATCAATGGTGCTCGGCCTCCTTTACTCAAGCCACCGCCGTCGATGAGGCTTCCAAATTTGGATAATACTTGCTCCACTTGGGACATTTTGAAAGCTTTTGCTCCATTAGTTGATGATGAACATCAGGAGGAAGTAGGAGAACGAGTGGAACCATTAGTTGAAGGAGAAGGAGAGGGAAATATTGTGAGGCCCGTGATGCGCATAGGGTCTTGGGGTTCCTTCACGACCTCGAATGACGATGATTCTTCGAGCAGTACTACGGAGCCTGCAAATATTTCACCCAATATGAGAGGTTGTCCCATTATCACATCCTGGGTGGTCGGCAGGCTTCTTGGACGCGGTTCATTTGGATCAGTATACGAAGCAATTTCAGAGGATGGTACGTTCTTTGCACTGAAAGAAGTTTCACTGCTCGAGGATGATAGTCAGGGAAGACAAAGTATCGATCAACTTCAGCAGGAGATAGCTCTTCTAAGTGAGTTTGAGCATGAGAACATAGTTCAGTACTACGGCACGCATTCGGATGGGTCAAAACTCTATATCTTCCTCGAGCTTGTATCTCAGGGCTCCCTTATGAGTCTATATCAAAGGACAATCCTTATGGACTCCATTGTTTCTGCCTACACAAGGCAGATTCTGTCTGGTTTAAAGTATCTTCATGAGCGAAATGTGGTTCACAGGGATATTAAATGTGCTAATATATTGGTGGATAAAAATGGATCTGTGAAGCTCGCAGATTTTGGTTTGGCGAAGGCAACAAAATTGAACGACGTTAAATCTTGTAAGGGAACTGCGTATTGGATGGCACCTGAGGTGGTTAATGGGAAGGGTCAAGGATATGGTCTTCCGGCCGATATCTGGAGCCTTGGGTGCACAGTATTGGAAATGTTAACTCGAAAGCTTCCATATTCAGAACTCGAATCTCATATGCAAGCACTATTTAGGATTGGAAAAGGCAAACCGCCTGCAGTTCCCGAGTCTCTCCCAAAAGATGCACAGGATTTCATTCGGCAGTGCCTACAAGTTAATCCAAAGGACCGTCCTACTGCTGCTGATCTATTAAATCACTCGTTTGTGAAAAGACCAGTTTCCAGTTTATCAGGGTCGGCATCTCCTTACAACAGGCCAGGCAGAAGGATTTAA 2124 44.73 MNVFPQRPHYVIKGWRLVPSALFVGGKKNHHLNDMELVKACIIAWAIWDNRNKFMHLKIIQLVIGRYEWILDYAVEVGALPKELSNVEIVYFPSYDINSHNMHILHVDAACVQNTLEIGYMDASSKFGALGCLLTVMLLHYSTVKLDMAWPKFFSPRKKGKPMDPRKIAGKPKLGRLNAAKNIDYDATSSSSSLEDSSGSLYTRSMETPDPSSFRIKGLDGEVDLICRTLGLDGPDDFAIPMEAWEARKVRSSSELLPRSRLYPMDTSPKTEEISKDKEDKEMEDELCRRVKDSVRISVELSTPKSEFPELNERRMATATGCSSRSGINGARPPLLKPPPSMRLPNLDNTCSTWDILKAFAPLVDDEHQEEVGERVEPLVEGEGEGNIVRPVMRIGSWGSFTTSNDDDSSSSTTEPANISPNMRGCPIITSWVVGRLLGRGSFGSVYEAISEDGTFFALKEVSLLEDDSQGRQSIDQLQQEIALLSEFEHENIVQYYGTHSDGSKLYIFLELVSQGSLMSLYQRTILMDSIVSAYTRQILSGLKYLHERNVVHRDIKCANILVDKNGSVKLADFGLAKATKLNDVKSCKGTAYWMAPEVVNGKGQGYGLPADIWSLGCTVLEMLTRKLPYSELESHMQALFRIGKGKPPAVPESLPKDAQDFIRQCLQVNPKDRPTAADLLNHSFVKRPVSSLSGSASPYNRPGRRI 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11904293 11912688 + CmPI595203_03g015120.1 Cmu03g1512 412298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1512 707 SUPERFAMILY Protein kinase-like (PK-like) 413 693 IPR011009 -
Cmu03g1512 707 ProSiteProfiles Protein kinase domain profile. 432 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1512 707 MobiDBLite consensus disorder prediction 188 208 - -
Cmu03g1512 707 Gene3D Transferase(Phosphotransferase) domain 1 430 699 - -
Cmu03g1512 707 MobiDBLite consensus disorder prediction 319 342 - -
Cmu03g1512 707 MobiDBLite consensus disorder prediction 399 420 - -
Cmu03g1512 707 FunFam Mitogen-activated protein kinase 1, putative, expressed 430 698 - -
Cmu03g1512 707 PRINTS Tyrosine kinase catalytic domain signature 510 523 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1512 707 PRINTS Tyrosine kinase catalytic domain signature 611 633 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1512 707 PRINTS Tyrosine kinase catalytic domain signature 655 677 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1512 707 PRINTS Tyrosine kinase catalytic domain signature 545 563 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1512 707 MobiDBLite consensus disorder prediction 261 285 - -
Cmu03g1512 707 SMART serkin_6 432 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g1512 707 ProSitePatterns Protein kinases ATP-binding region signature. 438 460 IPR017441 GO:0005524(InterPro)
Cmu03g1512 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g1512 707 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 259 688 IPR050538 -
Cmu03g1512 707 MobiDBLite consensus disorder prediction 270 285 - -
Cmu03g1512 707 Pfam Protein kinase domain 433 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1512 Cmu-Chr3:11904293 Cmu08g1494 Cmu-Chr8:26874659 2.70E-56 dispersed
Cmu03g1512 Cmu-Chr3:11904293 Cmu05g0923 Cmu-Chr5:8407934 9.40E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75407 PF00069 Pkinase 6.30E-71 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1512 K13414 - csv:101218538 1001.12