Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1576 ATGTGTATACGATGCAAATCACGGCCCGGAAACGTTTATAGCTACGGTGTCATCTTGCTTGAGATCCTCACTACCAGACTGCCAGTTGATGAGAAGTTTGGTGATGGAGTAGACTTGGTGAAATGGGTGCATAGTGCTCCTTTGAGGGGCGAAACACCTGAACAGATACTCGATTCCCAGCTAGGCACGGTTTCGTTTGGCTGGAGGAAGGAGATGCTTGCAGCTCTCAAGATTGCATTGCTCAGCTCTGACAGCATACCAGCCAAAAGGCCAAAAATGAAGAAGATGGTGGAAATGCTTCTGGAGATCAAGCAAAATTGA 321 47.35 MCIRCKSRPGNVYSYGVILLEILTTRLPVDEKFGDGVDLVKWVHSAPLRGETPEQILDSQLGTVSFGWRKEMLAALKIALLSSDSIPAKRPKMKKMVEMLLEIKQN 106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16014613 16014933 + CmPI595203_03g015760.1 Cmu03g1576 412362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1576 106 Gene3D Transferase(Phosphotransferase) domain 1 4 106 - -
Cmu03g1576 106 SUPERFAMILY Protein kinase-like (PK-like) 9 103 IPR011009 -
Cmu03g1576 106 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 7 104 IPR051564 GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1576 Cmu-Chr3:16014613 Cmu04g0096 Cmu-Chr4:1048246 3.30E-46 dispersed
Cmu03g1576 Cmu-Chr3:16014613 Cmu07g1648 Cmu-Chr7:31814326 2.50E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1576 - - - 0.0