Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1626 ATGGGATCCTGCTTGTCTGCAGGAAGTAAGGAGGCCATTACTGGTTCCTCTGTATCTCCTGTGTTGGGAGCAATTAAGCAGAAAGACTCAGACAATGTGTTTGAGCAGCAGAATCAGGGTGAAGCGACAGTACACAGAATTCCTGGTAGGATGTTCTTGAATGGGTCCAGTGAAGTTGCTTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTTTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCCCTGAAACTGACTGCACATTGGGAAGCTAATGAAGACATTTCAGAAGAGTTAGGTTGTAAAACAGAAGCTGTTAACAATGAAGATTCTACCTTAGAAATTAGTTGGAAGGAAGATAGTTCTCCCCTTACGCAGCCAGAAATTTCTGAAAAACTGAAGGAATCATTTCTGAAGGCTTTTCAGATAATGGATGGAGAACTCAAAATTCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTTGGGGACTCTCGGGCTGTGCTGGGTACCAGAGATGAGGATAATTCTCTCCAAGCGGTTCAATTGACCATAGATCTCAAGCCAGATATTCCAGGGGAAGCTGAGAGAATTCTCAAATGCAAAGGTCGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTAGAGTATGGCTTCCAAACAATGATTCCCCCGGGCTGGCGATGGCTCGATCTTTTGGAGACTTTTGCCTCAAGGATTTCGGTCTAATTTCTGTTCCTGAAATATCATATCGTTTTCTGTCTGACAAGGACGAGTTTATAGTTTTAGCTACAGACGGAATTTGGGATGTTCTTTCAAACAAAGAGGTAGTTGACATTGTAGCATCAGCCCCAGCTCGTTGTGCAGCCCGGTCATTGGTTGAGTCTGCAACTGAAGCATGGAGATGCAAGCTTCCTTCTTCCAACATTGACGACTGTGCCGTTGTCTGTCTCTTCCTTGACTCGAACTTGAACGTTATGGCATCAGAGACAAATATTAAATACAAGGAGGTTAAATCAGCAATCCAAGCTGAGACGGCCACGGTAGATGATGTCTCTGGAGAGGACTTAGAGTGGTAG 1221 44.23 MGSCLSAGSKEAITGSSVSPVLGAIKQKDSDNVFEQQNQGEATVHRIPGRMFLNGSSEVASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANEDISEELGCKTEAVNNEDSTLEISWKEDSSPLTQPEISEKLKESFLKAFQIMDGELKIQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDEDNSLQAVQLTIDLKPDIPGEAERILKCKGRVFAHQDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLSDKDEFIVLATDGIWDVLSNKEVVDIVASAPARCAARSLVESATEAWRCKLPSSNIDDCAVVCLFLDSNLNVMASETNIKYKEVKSAIQAETATVDDVSGEDLEW 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18742968 18745625 + CmPI595203_03g016260.1 Cmu03g1626 412412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1626 406 CDD PP2Cc 59 367 IPR001932 -
Cmu03g1626 406 SUPERFAMILY PP2C-like 57 368 IPR036457 -
Cmu03g1626 406 PANTHER PROTEIN PHOSPHATASE 46 366 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu03g1626 406 Gene3D - 55 373 IPR036457 -
Cmu03g1626 406 SMART PP2C_4 48 365 IPR001932 -
Cmu03g1626 406 ProSiteProfiles PPM-type phosphatase domain profile. 59 367 IPR001932 -
Cmu03g1626 406 Pfam Protein phosphatase 2C 152 331 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1626 Cmu-Chr3:18742968 Cmu11g0993 Cmu-Chr11:15672333 3.10E-145 dispersed
Cmu03g1626 Cmu-Chr3:18742968 Cmu02g1730 Cmu-Chr2:31174190 7.00E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1626 - - - 0.0