Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1637 ATGAAGCTCCAAGTCGCCGACGACGATCTCGACGCCCTTCTTCTTCCTCCTCCTAACTTCTCCATGGTTGAGGACGGCATTTTCCGATCCGGCTTCCCTCAGCCCCTCAATTTCCCCTTCCTCCGCACCCTCAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCAGAGGAGAATTTGGAGTTTCTTAAAGCTAATAATATCAAGCTTTTTCAATTCAAAATTGAAGGCAAAAAGGAGCCTTTCGTTTCGATTCCAGAGGATGCTATTCTTGAGGCTCTAAAAATCCTGATTGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGAGGAAAGCTAATAAAGCCTTCATTTGTCCCACAATCACAGCATCGAACAGGCTCGCTCGTTGGTTGCCTGAGGAAGTTTCAGAACTGGTGCTTGAGTTCGGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAATCGAGGGTGACGGATCTACAATTCATCGAGAAATTCGACATTGGGTCTCTGAGGCAATGTGTTTACAGCATCATATATCAGTATCAAGGTCAAACCAAACATCCTTTGACATTCATTGCAAGGACTCTTTTGTGGCAATATGGTGTAAATGTGAGTTATGTTAAGGCTCAGAAAGATAGTGAGTTTGCACTCAATTCCATCAGAGGGACTCCTGAGTCCTCATATGGCCTTTTGCCTTCGTCCTCAGATGTAGATTCAATTTTAGGCAGTGATTTGGGTATCTCATCTTTAGGTGGAGCCTGCATAATATAG 786 44.78 MKLQVADDDLDALLLPPPNFSMVEDGIFRSGFPQPLNFPFLRTLNLRSIIYLCPEPYPEENLEFLKANNIKLFQFKIEGKKEPFVSIPEDAILEALKILIDVRNHPILIHCKRGKLIKPSFVPQSQHRTGSLVGCLRKFQNWCLSSVFEEYQRFAGMKSRVTDLQFIEKFDIGSLRQCVYSIIYQYQGQTKHPLTFIARTLLWQYGVNVSYVKAQKDSEFALNSIRGTPESSYGLLPSSSDVDSILGSDLGISSLGGACII 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19133120 19139298 - CmPI595203_03g016370.1 Cmu03g1637 412423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1637 261 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 192 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Cmu03g1637 261 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791(InterPro)
Cmu03g1637 261 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791(InterPro)
Cmu03g1637 261 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791(InterPro)
Cmu03g1637 261 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791(InterPro)
Cmu03g1637 261 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 170 IPR029021 -
Cmu03g1637 261 FunFam probable tyrosine-protein phosphatase At1g05000 13 174 - -
Cmu03g1637 261 Pfam Tyrosine phosphatase family 14 174 IPR004861 -
Cmu03g1637 261 CDD PFA-DSP_Siw14 19 171 - -
Cmu03g1637 261 Gene3D Protein tyrosine phosphatase superfamily 13 174 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1637 Cmu-Chr3:19133120 Cmu09g1064 Cmu-Chr9:10864755 2.30E-53 dispersed
Cmu03g1637 Cmu-Chr3:19133120 Cmu02g1800 Cmu-Chr2:31878440 8.80E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1637 K18045 - csv:101211082 323.168