Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1684 ATGGTAGAGTTACTCAATCAACCAAAAATTCTCCAAAGAGCTGTTGAAGAATTGGACAAAGTTGTTGGAAGAGATAGGTTGGTTCAAGAATCTGATATCCCTAATCTCAAGTATCTCACAGCTTGTATAAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCACGTTTCCAATTTTGACATTGTTGTGGGTGGCTATTTCATCCCAAAAGGTAGCCAAGTTTTGCTATGTCGTCTAGGTCTCGGCCGAAACCCAAGGATTTGGGAGAATCCAATGAGATTTGATCCAGAACGACATTTAAAAGATGGAACAGTTGAATTTGGAGTTTCAGAACCTAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGAGGTTGCATTGGTAGCTCACTTGGCACTAATATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCGTGGACTTTATTGCCAGGAATCACACAAATAGCCTTAACTGAAGCTGATGAACTCTTTCTTTCAAAACCATTGTATCTACATGCAAAGCCACGCTTATCTCATATTATAAACATTTCCCTTAACCGTAGTAGGCAAGCAGGTAAACCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTTGGCCTTAGTGATTTGACGGTGCCGAGTGGAAGGGCCATCGTTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGA 741 42.11 MVELLNQPKILQRAVEELDKVVGRDRLVQESDIPNLKYLTACIRESFRLHPFSPFNVPHVSNFDIVVGGYFIPKGSQVLLCRLGLGRNPRIWENPMRFDPERHLKDGTVEFGVSEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWTLLPGITQIALTEADELFLSKPLYLHAKPRLSHIINISLNRSRQAGKPSAKAEGSLTARPTRRAGTKVGLSDLTVPSGRAIVQRIKVTLGITG 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20994701 20996737 - CmPI595203_03g016840.1 Cmu03g1684 412470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1684 246 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PRINTS P450 superfamily signature 121 130 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PRINTS P450 superfamily signature 130 141 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 Pfam Cytochrome P450 2 168 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PRINTS E-class P450 group I signature 130 153 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PRINTS E-class P450 group I signature 120 130 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 1 185 IPR051382 -
Cmu03g1684 246 SUPERFAMILY Cytochrome P450 1 183 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu03g1684 246 Gene3D Cytochrome P450 1 186 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1684 Cmu-Chr3:20994701 Cmu03g1899 Cmu-Chr3:26153163 2.00E-91 dispersed
Cmu10g1445 Cmu-Chr10:8899670 Cmu03g1684 Cmu-Chr3:20994701 5.10E-16 dispersed
Cmu10g1449 Cmu-Chr10:8927580 Cmu03g1684 Cmu-Chr3:20994701 6.20E-16 dispersed
Cmu03g1684 Cmu-Chr3:20994701 Cmu01g1856 Cmu-Chr1:32157693 6.90E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1684 - - - 0.0