Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1772 ATGGATCAGACGGCTCCTAAGGTTGCAAGAAATCTGGGAAGTCCAGAATCATGTCGAAAGTTTCTAGCTGTTGGTCAGTTCTTAGTCAACACTGTTGAATGCACCATGGGTGTTTCTGGAAAATGGTTCAAAGCGTTAGTTGGTTCAAAAAAGTCAGAAAAATCTCAGTCATCAGAACATGATGAAAATGCGAGGACAGTCACCAACAAGTTTTGGCATCGGAGAAAGCATTCTGTTGATATTGATGCTGATAAACTTCAGCATGAGTTTAATTCAAATTTTACCCCATTTGTTGAAGAGTCCAATGCTCTTTCAGAACCAGAAGCTGTTTCTATTCCTTCTGATTCACTTCAAACTTATGATGCATTGCATAGTCAACAAAATGATATAGAAGAACAGGCTGCTATACGCATCCAAACAATGTTTCGAGGATTTCTGGCTAGAAGAGCTCTCCGAGCTCTCAAGGGATTAGTTAGACTTCAAGCTCTTGTCAGGGGTCACGCTGTCAGAAAACAAGCTGCAATAACTCTACGCTGTATGCAAGCTTTAGTGAGAGTCCAGGCTCGTGTTCGAGCAAGGCGTGTACGTATTGCATTGGAAAGTGAAACTGCACAACAAAAACTTCAACAAGAACTTGAAAACCAGGCTCGAGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTTGGATCTGTTGAAGACATTCAAGCAAAATTAATAAAAAGGCAGGAGGCTGCAGCTAAGCGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGACAGCAGGCTGCCCTCTCTCAGTTCGAACCAGATAAAAGCAGCTGGGGTTGGAACTGGTTGGAAAGGTGGATGGCTGTTCGTCCGTGGGAAAACCGCTTTCTTGACATCAATCTGAGAGATGGAGTGATGATTCGTGAGAATGGATTATCTGAGGGCAAAATTAACACTAAATCTCATTTAAAGACTACTGCCAAGAAGACAAACTTAGTAACTGATCAATCAAACCTCTCGAGCCAAAAAACTGCTGCCTCGCATTCTGATGGATGTGGTTCGTCATCTCCCACTAAGTCAGCTGGCACTGTAGAAGTATCCAGTGCACAGATTCAGAAGCTCAAGCATAAACATGCACCTGAGAGGCCGTTTGAAGAAGTCAAAGCAAAAGTGGATACTGGTTTAAGATCACATAGCAATCCAAAAGAGAGATCCACACCATTGGTCAAAAATGCAAAGAAGCGATTATCCTTGCCTAATAATGATCCTGGTAGTCAAAATCAAACGGTGAGAAATTCCACTGGTAAAGCAACCATGGCGAAGTCAATCAACGATAAACCGAAGTCAATTTCCAGATCAGTGAGTTGTTGCAATGGTTGGCAAATATCTGAGGGAATAAGGTTGGTGAGTTTCCTAGGGTACCAAGGAGACGACTCGACTCGTCCAACCAACCCAACCCATGCTCAATAG 1479 43.2 MDQTAPKVARNLGSPESCRKFLAVGQFLVNTVECTMGVSGKWFKALVGSKKSEKSQSSEHDENARTVTNKFWHRRKHSVDIDADKLQHEFNSNFTPFVEESNALSEPEAVSIPSDSLQTYDALHSQQNDIEEQAAIRIQTMFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESETAQQKLQQELENQARVREIEEGWCDSVGSVEDIQAKLIKRQEAAAKRERAMAYALAHQWQAGSRQQAALSQFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIRENGLSEGKINTKSHLKTTAKKTNLVTDQSNLSSQKTAASHSDGCGSSSPTKSAGTVEVSSAQIQKLKHKHAPERPFEEVKAKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTVRNSTGKATMAKSINDKPKSISRSVSCCNGWQISEGIRLVSFLGYQGDDSTRPTNPTHAQ 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23563207 23574231 + CmPI595203_03g017720.1 Cmu03g1772 412558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1772 492 MobiDBLite consensus disorder prediction 374 402 - -
Cmu03g1772 492 Gene3D - 131 173 - -
Cmu03g1772 492 ProSiteProfiles IQ motif profile. 131 159 - -
Cmu03g1772 492 MobiDBLite consensus disorder prediction 331 373 - -
Cmu03g1772 492 Pfam IQ calmodulin-binding motif 133 152 IPR000048 GO:0005515(InterPro)
Cmu03g1772 492 MobiDBLite consensus disorder prediction 331 454 - -
Cmu03g1772 492 PANTHER IQ-DOMAIN 5-RELATED 40 421 - -
Cmu03g1772 492 SMART iq_5 153 174 IPR000048 GO:0005515(InterPro)
Cmu03g1772 492 SMART iq_5 130 152 IPR000048 GO:0005515(InterPro)
Cmu03g1772 492 ProSiteProfiles IQ motif profile. 155 182 - -
Cmu03g1772 492 MobiDBLite consensus disorder prediction 421 454 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1772 Cmu-Chr3:23563207 Cmu09g1952 Cmu-Chr9:35600847 8.60E-33 dispersed
Cmu03g1772 Cmu-Chr3:23563207 Cmu05g1839 Cmu-Chr5:28444706 2.80E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1772 - - - 0.0