Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu03g1899 | ATGAAAGCTTCCTTATTCATTAGTCAATTGGCTGATGCATATCAAAATTGTGCAAAAGCAGCCATAGCCAAAACCTTCATTTCTATCGTTTTATTCATATCTTCCATTACTATTTATGTTATTAAGTTCTCTCAATATTACCGCAAAAGAAAGTCCTTAGTCCGGCGGCTACCACCAGGCCCAAAGCCATGGCCCCTCCTCGGCTGTCTTCCAGCAATGTTGAGGAACAAAAACTTGGCAATACACCAATGGATTCATGAAATAATGAAGCAATTCAACACTGAAATTGCTTGCATCCGTCTCGGATCAAATACCCACATAATTCCTGTGGCTTCTCCAGAACTCGCTCTTGAGTTTTTAAAGACACACGATTCTGTTTTTGGATCACGACCCACTTCCATGACTGCGGAGATGTTGAGCCGTGGATATCTAAGTGCAGTTCTTTCACCCACGGGGGATCAATGGAAGAAGATGAGAAGGATCCTGGTTTCTCAAGTACTCAATCCTTCGACCCTCCATGGAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTACATTACATTTTCAGCCTCAGCAAAAATGGTGAAGCGGTCAACATAAGAAGCATTGCACAACATTATTGCAGTGGCATTATTAGAAGAATGGTATTCAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGAGCATCTTTTGAAGAAGAGAACCATAATCAAGCATTGTTTACAATTCTAACGCATCTTAATGCATTTTCCATATCAGAATTTATGCCTTGCTTGAAGCCATTCGATCTGAATGGACACAAGAAGATAGTAAAAAGGGCTTTGAAAGTCATAAGAGATCTTGACGAACCCATAATAGAGGAAAGAGTGAAAGAATGGAGAGATGGGAAGAAAAAGGAGGTGGAGGACATCCTTGATATTCTTATCTCCCTCAAAAATGAGAATGGTAAATCATTGTTGTCAATAGAAGAGATTAAGGCTCAAGTCACGGAGTTGCAACTTGCAACCATAGATAATCCTTCAAACGCAGTGGAATGGGCAATGGCAGAGTTACTCAATCAACCAAAAATTCTAGAAAACGCTATTGAAGAATTGGACCAAGTGGTTGGAAGAGATAGGCTGGTTCAAGAATCAGATATACCTAATCTCAAGTATCTCACAGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCATGTTTCCAACGATGACATTGTTGTGGCTGGCTACTTCATCCCTAAAGGTAGCCAAGCTTTGTTATGTCGTTTGGGTCTCGGTCGAAACCCAAGGATTTGGAAGGATCCATTGAGATTTGATCCAGAACGTCATTTAAAAGATGGAACAGTTGAATTAGGAATTTCAGAACCTAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGGGGTTGCATTGGTTCCTCACTTGGCACTAACATTACTATGATGTTATTTGCTAGACTTCTGCAAGGATTTTCATGGAGCTTATTGTCAGGAATCACAAAGGTAGACTTCTCTAAAACTCAAGAACTTTCTCTACTAGAACCCTTGCATTTGCATGCAGAACCACGTCTATCTCATAGTATGTACCCAAGGATTACTTTTGTCAACTAG | 1644 | 40.33 | MKASLFISQLADAYQNCAKAAIAKTFISIVLFISSITIYVIKFSQYYRKRKSLVRRLPPGPKPWPLLGCLPAMLRNKNLAIHQWIHEIMKQFNTEIACIRLGSNTHIIPVASPELALEFLKTHDSVFGSRPTSMTAEMLSRGYLSAVLSPTGDQWKKMRRILVSQVLNPSTLHGMLGQRTKEADTLLHYIFSLSKNGEAVNIRSIAQHYCSGIIRRMVFNRRYYGKGREDGGASFEEENHNQALFTILTHLNAFSISEFMPCLKPFDLNGHKKIVKRALKVIRDLDEPIIEERVKEWRDGKKKEVEDILDILISLKNENGKSLLSIEEIKAQVTELQLATIDNPSNAVEWAMAELLNQPKILENAIEELDQVVGRDRLVQESDIPNLKYLTACIRESFRLHPFSPFNVPHVSNDDIVVAGYFIPKGSQALLCRLGLGRNPRIWKDPLRFDPERHLKDGTVELGISEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLSGITKVDFSKTQELSLLEPLHLHAEPRLSHSMYPRITFVN | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 26153163 | 26155473 | - | CmPI595203_03g018990.1 | Cmu03g1899 | 412685 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu03g1899 | 547 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 34 | 539 | IPR051382 | - | |
| Cmu03g1899 | 547 | Gene3D | Cytochrome P450 | 42 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | Pfam | Cytochrome P450 | 58 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g1899 | 547 | SUPERFAMILY | Cytochrome P450 | 58 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu03g1684 | Cmu-Chr3:20994701 | Cmu03g1899 | Cmu-Chr3:26153163 | 2.00E-91 | dispersed | |
| Cmu03g1685 | Cmu-Chr3:20996767 | Cmu03g1899 | Cmu-Chr3:26153163 | 6.00E-150 | dispersed | |
| Cmu03g1890 | Cmu-Chr3:25978828 | Cmu03g1899 | Cmu-Chr3:26153163 | 7.10E-179 | dispersed | |
| Cmu03g1891 | Cmu-Chr3:26004737 | Cmu03g1899 | Cmu-Chr3:26153163 | 2.00E-198 | dispersed | |
| Cmu03g1899 | Cmu-Chr3:26153163 | Cmu05g0085 | Cmu-Chr5:840064 | 1.60E-67 | dispersed | |
| Cmu03g1897 | Cmu-Chr3:26140508 | Cmu03g1899 | Cmu-Chr3:26153163 | 1.80E-203 | proximal | |
| Cmu03g1899 | Cmu-Chr3:26153163 | Cmu03g1900 | Cmu-Chr3:26179336 | 3.20E-254 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu03g1899 | - | - | - | 0.0 |