Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g1978 ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGACTAGGGCTAAGTGAAACGAAGTTGATGGAAATTATGGAAGCAAGAACAAGAAGAGATAAACAAAGACTTGGCTCCAAGCTTGAAGGATCATCATCAATTTCTCCTGTTTTCATTTCAACAGTCAGCAATGGTGTCTGCTGGTCATCGGTTGTCGGTTAG 1383 44.18 MRPVKREPTSSSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQGLGLSETKLMEIMEARTRRDKQRLGSKLEGSSSISPVFISTVSNGVCWSSVVG 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27766739 27770186 + CmPI595203_03g019780.1 Cmu03g1978 412764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g1978 460 MobiDBLite consensus disorder prediction 208 231 - -
Cmu03g1978 460 PANTHER UNCHARACTERIZED 38 377 IPR027786 GO:0005634(PANTHER)|GO:0005634(InterPro)|GO:0006281(InterPro)|GO:0006281(PANTHER)|GO:0030915(PANTHER)|GO:0030915(InterPro)
Cmu03g1978 460 MobiDBLite consensus disorder prediction 28 60 - -
Cmu03g1978 460 MobiDBLite consensus disorder prediction 1 60 - -
Cmu03g1978 460 Pfam Nse4 C-terminal 250 337 IPR014854 -
Cmu03g1978 460 MobiDBLite consensus disorder prediction 191 233 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g1978 K22825 - csv:101220149 698.738