Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu03g1992 | ATGAGAGCCAGCGTAAGAAAGATTGGCCTTGTGAGCATTTCTTGGGGGGATATGGAGAAGGATTTACGGTCAAAAGAAAAGGAGCGAGTTTTCTTCCCAGCCCTCGGTGGTAGGAAGAGGTTCAAGCAAGCAGTGGCAGTTAATCATGACAATGTGTCTAATCAGCGTGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGACTTCGTATACTTGAAGAAACTGAACCAAAATTGGATGCAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGTTTGTCTGCTGTTGGCAAGGAAAAGAAGCTATTATTTATTTCCTTATACTTTCTTATATGGGGGGAAGCATCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTTTGGGAAATGGATGAGGTACTGATGCATCAGATTGTGCAGCCGGCCAAGAGCTGTGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTACGAGGTTCTGGCTGCTCTCTTCAAACTTGGCATGCCAAACCTTTAG | 606 | 42.74 | MRASVRKIGLVSISWGDMEKDLRSKEKERVFFPALGGRKRFKQAVAVNHDNVSNQREHVVHLLANEQSRLRILEETEPKLDAAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSAVGKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHHMVWEMDEVLMHQIVQPAKSCESKDGVSFLDQVICPLYEVLAALFKLGMPNL | 201 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 27998019 | 28003584 | + | CmPI595203_03g019920.1 | Cmu03g1992 | 412778 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu03g1992 | 201 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 48 | 191 | - | GO:0005886(PANTHER)|GO:0046527(PANTHER) | |
| Cmu03g1992 | 201 | SMART | FKS1_dom1_2 | 118 | 201 | IPR026899 | - | |
| Cmu03g1992 | 201 | Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 | 120 | 193 | IPR026899 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu03g1992 | Cmu-Chr3:27998019 | Cmu03g1999 | Cmu-Chr3:28112748 | 1.10E-74 | dispersed | |
| Cmu03g1989 | Cmu-Chr3:27901461 | Cmu03g1992 | Cmu-Chr3:27998019 | 3.10E-73 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu03g1992 | K11000 | - | csv:101216435 | 273.092 |