Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu03g1999 | ATGACTGTCATTAAGCAAACGCTAGCCAAGAGGGAGGGTGGAACCATAGATAGAAGCCATGACATTACTCGGTTACAGGAGTTCTACAAACTATACCAAGAGAAAAATAGTGTAGATAAGCTTTGGGAAGGTGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGCAATGGGAAAGGGTACGGGTAGTTTTAGAAAGAGGAGGAACAAGACCCATACTCTCTGTGTGCGGTGTGGCCATCGCAACTTCCATCTCCGGAAGAGTTGCTGTGCAGCCTGTGCTTTCACTGTTGCTCGCAAGTACTTGCACCACGTTCCGCATAGATTTAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCCATGAATACAGGAGCTGTAGCATTAGCGTTGGAATGGAAAACATTGAAGCGAAAAAAAGGCTTTGCAACCCTGAAAGTATTGGCCATGGTACTGAAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATTGGATGCGGCAATGACAGAGGACCTAATTGCATATAATATTATTCCATTAGATGCTCCTTCTATGACAAATGTTATTGGGTCCTTGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCTGCAGAATTTTCTATTCCGGAGACTAAGAGTCCTGATATACTTGACTTTCTACACTTCGTTTTTGGATTTCAGAAAGACAATGTGTCTAATCAGCGCGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGACTTCGTATACTTGAAGAAACTGAATCAAAATTGGATGCAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTATGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGTTTGTCTGCTGTTAGCAAGGAAAAGAAGCTATTATTTATTTCCTTGTACTTTCTTATATGGGGGGAAGCATCCAACGTCAGATTTCTCCCAGAATGCTTATGCTACATATTTCACCATATGGTTCAGGAAATGGATGAAGTATTGAGGCATCGGATTGCGCAGCCAGCCAAGAGCTGTGAGTCTAAATATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTATGAGGTTCTGGCTGCGGAAGCTGCAAACAATAATAATGGGCAGGCACCATATTCTGCATGGAGAAACTATGATGATTTTAACGAGTATTTCTGGTCGCTTAGATGCTTTGACCTCAGTTGGCCATGGCATAAAGGCAAATCTTTTTTTCAAAAGCCAACACCAAAATCAAAGAGTATGCTTGGTAGAAGTCGTCATCAAGGGAAAACGTCATTTGTTGAGCATCGTACTTTTCTTCGTCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTTATGACATTCCAGGCTCTGACCATTGTTGCATTTAACAATGGAAACTTTAATATGAAGACATGGCTGGAAGTTCTGAGTCTTGGTCCGACATTTGTTGTAATGAAGTTTATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATATTCTACTTCAAGGCGTATTTTTGTTTCTCGAATTCTTCTTCGTTTTCTTTGGTTCAGTATTGCATCAGCTTTGATAACATTTCTTTATGTGGAAGCTCTTCAGGAAAGGAGTAAACCAAATGCAGAAAGAGTGATGTTCAGACTATATGTAATTGTGATTGGAATATATGGTGGTGTACAGCTTTGTCCCAGTATCCTCATGCATATACCTGCTTGCCGTCTTTTAATGAATCAATGTGATTTGTGGCCTCTTGTTCGCTTTTTCAAGTGGATGCGTCAGGAACGGTACTATGTTGGAAGTGGGATGTATGAGAGGACTACTGACTTTATTAAATACATGCTTCTGTGGATTATCATTCTTGGTGGAAAACTTGCACTTGCTTATTTTCTTCAGATCAAGCCTCTTGTTGGACCTACAAGGCTTATTGTAAATAGGAGAGATATAAGATATTCGTGGCATGACTTTGTGTCTAAAGATAATCATAATGCATTGACTATTCTTAGCTTGTGGGCCCCCGTGGTTGTTATTTACATCTTGGACATCCATGTTTTCTATACTATTATATCGGCCATATGGAGTTTCTTAATTGGGGCAAGAGACCGTCTTGGAGAGATTAGATCATTAGAAGCCATACATAAACTGTTTAATCGGTTTCCTGGAGCTTTTATGGACACTCTACATGTTCCTCTCCAAGACAGGCTTGGGCCTTCGAATCGGTCATTAAGTCAGGTTGTTGAGAAAGACAAGTTTGATGCTGCTCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAACTTGGAAATGGAGTTACTTCAAATGCCTAAAAACAATGGTAATCTTCCCATGGTTCAGTGGCCACTTTTTCTTCTTGTCAGCAAGATATCTCTAGCTAAGGATATTGCTGTTAAAAGACGAGATTCGCAAGACAAGCTGTGGAAGCATATTTCCAGAGATGACTATATGAAATATGCAGTACACGAATGTTACCACGCCATTAAGCTTATCTTAATGGAATTACTAGTTGGGGAAGGAAGGATGTGGGTTGAAAGGGTATTTGAAGACACTGAAGCTAGTTTAGCAAACAATTCCATTCTAAATGACTTCCAGCTAAATAAGTTGCCACTTGTGATTACAAGAGTAACTGCTCTGATGGGTATTTTGAAAGAGCCAGAAACTTCGGAGCTGGAAAAAGAGGCTATTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACCATGATCTCCTTTCCAGTGACAAGAGGGGGCACTATGAAACATGGAACATATTAGTAAAAGCCAGAAATGAAGGTCGTTTGTTTACAAAGTTAAATTGGCCCAAAGATTTAGAATTGAAGTCACAAGTCAAAAGATTGTATTCCTTGTTAACCATTAAAAAGACAACTTTAGATATTCCATTTAACTTTGAGGCCCAACGGAGACTGCAATTCTTTACAAATTCACTTTTCATGGTGATGCCAACTCCAAAACTTGTTCGTCAGATGCTTTCCTTCAGTGTATTCACTCCGTATTATTCTGAGACGGTGCTCTATAGTATGGGGGAACTCCTGAAGAAAAATGAGGATGGGATAACAACCTTGCTTTACCTGCAAAAAATTTATCCAGTAGAAGCCACTTCTTACGTTCATAAGGAGTTATTTTATAAAGATTTCAACAATTCGATAGATCAACACAGAGTGAACAAAGTGGCAGAGGATGAAGTTGGCGGTTTTAACTCAATAAGCCGCGTAAGAAAGGGACGTAAGTTTATTCCATCGTCGGAAAAAGGATTGGAAAAGGCCGAGGATGAAGGAATTGTTGTGCCAGTGGCAAGGAATGCTGAAGGCCAGGCAAGAGACGCGTCTCTTCATATTCTTAGCCAAAAAGCTGAAAAGTCTAATCTGTGTGAGAACAAAGGTGAAGGAGTCGAAAAGTTGGAAGTTAATTGGAGAGAGAATTCCGGCGGCCGCATTTATCGAATTCCAAGGTCGGATGAGGAAGGCATTCAGTCATCTGAGCCAAAATCCCAGCGAGAGTCCCAGCGAGATCCAATCCAGGACTTGACTTGCATCCCTGACTCCCAGCGAGACTCACAGCGAGAACCAAACCGAGAGTCATCTTGCTACCTAGATTCTCAGCGAGAACCATCCCGAGAGTCGACTCGCTGCCCGGACCACCAGCGAGTTTCCCAGCGAAAATCAATGCGGGAATCGACTCTCATCACAGGACCACAGCGAGATTTCCAGCGATATCCACTCCAGGAGCCGCCTTGCCTTACAATGGAACTAGATCAACGCGCATTTATTATTGATTCAAGCATTAAAAGCAATAATAAAGAGAGAGAAATTGAAAAGACGCTTGAAGAGGAAAAGGCAGCCGGTTTAATCCAGCGTGTGGCCAATAAAAAGGGGTTGGAAGGTATATTAAATGATGGAGTAAATGAGGAATTATGCCTTAAACTCCACCGGCCTAATCGATTCGCATTTCCGCAGAACAATTCAAAGGATATACAAGATGTTTTCGAAAAGTCACATGCAGGAAGTTTGGGCGACGACATTAATACGCGTGCATTAAATAATGTGGTATTCCAAGAACCAATGACAGCAATGACAGAAGGAACTGTCACTCCTTCCGAAGCCTCTCCGAATCCTCAATCGTGTAATCTCAGCACGACTCATTATCATGAGTTGTGGAGATTCACCGACAATGATTTCTCATTACATGAGTGGAAGAACTTTCTTGCTCGAATTGGCCGAGATGAGAATGAAGTTGACCCAGAATCGTTTGATAATCCTAATGACATCCTTGCATTGCGATTTTGGGCCTCTTATCGAGGACAGACATTAGCAAGAACAGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAGAGAGGAACTTATGGAGACTTCAAAGCTGCCATTCCTTGTACTGATGCTACTGATACTCGGGGTTTCGATTTATCTCCTGAAGCACGTGCACTAGCAGATCTTAAATTTACATATGTTGTGACATGTCAGATATATGGCAGACAAAGAGAACAACAAAAACCAGAGGCCGCTGACATTGCATTGCTTATGCAAAGAAATGAAGCCCTTCGTGTTGCCTACATCGATGATATTGAAACCCTGAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTTGTAAAGGCTGATATCAATGGAAAAGATAAGGAGATATATTCAATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAACCATGCTATTGTTTTTACTCGTGGAAATGCTATTCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTCGAGGAATTTGATCATTATCATGGTATTCGTCCTCCTACCATACTAGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATCTCTTGCTTCATTCATGTCAAATCAAGAAGCTACTTTTGTGACTCTTGGTCAACGTATTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGAGTTTTTCATCTAACACGAGGTGGCATCAGCAAGGCCTCCCGTGTTATCAACATTAGTGAAGATGTCTTTGCAGGATTTAATACAACATTGAGGCAAGGGAACGTTACTCATCATGAGTATATTCAG | 5292 | 40.97 | MTVIKQTLAKREGGTIDRSHDITRLQEFYKLYQEKNSVDKLWEGEMKLRESGAFSAMGKGTGSFRKRRNKTHTLCVRCGHRNFHLRKSCCAACAFTVARKYLHHVPHRFKSGFREGTEAAPMNTGAVALALEWKTLKRKKGFATLKVLAMVLKQLSDAIPEEMKRLMELDAAMTEDLIAYNIIPLDAPSMTNVIGSLAEVQAAVSALKYFSGLPKLPAEFSIPETKSPDILDFLHFVFGFQKDNVSNQREHVVHLLANEQSRLRILEETESKLDAAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSAVSKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHHMVQEMDEVLRHRIAQPAKSCESKYGVSFLDQVICPLYEVLAAEAANNNNGQAPYSAWRNYDDFNEYFWSLRCFDLSWPWHKGKSFFQKPTPKSKSMLGRSRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMTFQALTIVAFNNGNFNMKTWLEVLSLGPTFVVMKFIESVLDILMMYGAYSTSRRIFVSRILLRFLWFSIASALITFLYVEALQERSKPNAERVMFRLYVIVIGIYGGVQLCPSILMHIPACRLLMNQCDLWPLVRFFKWMRQERYYVGSGMYERTTDFIKYMLLWIIILGGKLALAYFLQIKPLVGPTRLIVNRRDIRYSWHDFVSKDNHNALTILSLWAPVVVIYILDIHVFYTIISAIWSFLIGARDRLGEIRSLEAIHKLFNRFPGAFMDTLHVPLQDRLGPSNRSLSQVVEKDKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNNGNLPMVQWPLFLLVSKISLAKDIAVKRRDSQDKLWKHISRDDYMKYAVHECYHAIKLILMELLVGEGRMWVERVFEDTEASLANNSILNDFQLNKLPLVITRVTALMGILKEPETSELEKEAIKAVQDLYDVVHHDLLSSDKRGHYETWNILVKARNEGRLFTKLNWPKDLELKSQVKRLYSLLTIKKTTLDIPFNFEAQRRLQFFTNSLFMVMPTPKLVRQMLSFSVFTPYYSETVLYSMGELLKKNEDGITTLLYLQKIYPVEATSYVHKELFYKDFNNSIDQHRVNKVAEDEVGGFNSISRVRKGRKFIPSSEKGLEKAEDEGIVVPVARNAEGQARDASLHILSQKAEKSNLCENKGEGVEKLEVNWRENSGGRIYRIPRSDEEGIQSSEPKSQRESQRDPIQDLTCIPDSQRDSQREPNRESSCYLDSQREPSRESTRCPDHQRVSQRKSMRESTLITGPQRDFQRYPLQEPPCLTMELDQRAFIIDSSIKSNNKEREIEKTLEEEKAAGLIQRVANKKGLEGILNDGVNEELCLKLHRPNRFAFPQNNSKDIQDVFEKSHAGSLGDDINTRALNNVVFQEPMTAMTEGTVTPSEASPNPQSCNLSTTHYHELWRFTDNDFSLHEWKNFLARIGRDENEVDPESFDNPNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGTYGDFKAAIPCTDATDTRGFDLSPEARALADLKFTYVVTCQIYGRQREQQKPEAADIALLMQRNEALRVAYIDDIETLKDGKVHKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFDHYHGIRPPTILGVREHVFTGSVSSLASFMSNQEATFVTLGQRILANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDVFAGFNTTLRQGNVTHHEYIQ | 1764 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 28112748 | 28179827 | + | CmPI595203_03g019990.1 | Cmu03g1999 | 412785 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu03g1999 | 1764 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 17 | 1079 | - | GO:0005886(PANTHER)|GO:0046527(PANTHER) | |
Cmu03g1999 | 1764 | SMART | FKS1_dom1_2 | 311 | 423 | IPR026899 | - | |
Cmu03g1999 | 1764 | MobiDBLite | consensus disorder prediction | 1226 | 1262 | - | - | |
Cmu03g1999 | 1764 | MobiDBLite | consensus disorder prediction | 1188 | 1211 | - | - | |
Cmu03g1999 | 1764 | MobiDBLite | consensus disorder prediction | 1188 | 1280 | - | - | |
Cmu03g1999 | 1764 | Pfam | Ribosomal protein L37e | 58 | 100 | IPR001569 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cmu03g1999 | 1764 | Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 | 313 | 420 | IPR026899 | - | |
Cmu03g1999 | 1764 | Gene3D | - | 57 | 122 | IPR011331 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cmu03g1999 | 1764 | Pfam | 1,3-beta-glucan synthase component | 1002 | 1091 | IPR003440 | GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro) | |
Cmu03g1999 | 1764 | Pfam | 1,3-beta-glucan synthase component | 1460 | 1764 | IPR003440 | GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro) | |
Cmu03g1999 | 1764 | SUPERFAMILY | Zn-binding ribosomal proteins | 57 | 100 | IPR011332 | GO:0006412(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g0834 | Cmu-Chr3:2676201 | Cmu03g1999 | Cmu-Chr3:28112748 | 2.00E-66 | dispersed | |
Cmu03g1991 | Cmu-Chr3:27980224 | Cmu03g1999 | Cmu-Chr3:28112748 | 1.80E-67 | dispersed | |
Cmu03g1992 | Cmu-Chr3:27998019 | Cmu03g1999 | Cmu-Chr3:28112748 | 1.10E-74 | dispersed | |
Cmu03g1993 | Cmu-Chr3:28009576 | Cmu03g1999 | Cmu-Chr3:28112748 | 8.40E-125 | dispersed | |
Cmu03g1999 | Cmu-Chr3:28112748 | Cmu06g1813 | Cmu-Chr6:29038063 | 0.00E+00 | dispersed | |
Cmu03g1995 | Cmu-Chr3:28055352 | Cmu03g1999 | Cmu-Chr3:28112748 | 0.00E+00 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu03g1999 | K11000 | - | csv:101216435 | 1666.36 |