Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2079 ATGGGGAGAGAACTGCAGAAGCAGCCGCAGCAAGAGATGGCCTCCGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCGGACATTCTCCCCGATCTCGAAAACTACGTAAACGAGCAGGTGTCGTCAGAAACGTACAGTTTAGATGCCAATCTATGCCTTCTTCGCCTTTACCAGTTTGAGCCCGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATGCCAGCTCCGGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGAGCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTCTGGGATGAAGCTGCCAAGAACCGTCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAGGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCAGAGGCAATCAATATTGAGGGCCTGTCTTTGGACAAATTTCTTGAGCACCAAGTCGCAAACTCTAGTTGGATTCTTGAGAAAGGTCATGGGAAGGGCCAACTTATTGTTATACCACCAAATGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGATAGCATTCCCTTGGATCACATTACTCGCATCTTTCCGATTCTTGGCTAA 699 46.21 MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSSWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLDHITRIFPILG 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 29172978 29175667 - CmPI595203_03g020790.1 Cmu03g2079 412865
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2079 232 FunFam Eukaryotic translation initiation factor 3 subunit K 128 231 - -
Cmu03g2079 232 Gene3D ARM repeat; domain 1 8 125 IPR016020 GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006446(InterPro)|GO:0043022(InterPro)
Cmu03g2079 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 11 229 IPR009374 GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)
Cmu03g2079 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
Cmu03g2079 232 Pfam CSN8/PSMD8/EIF3K family 67 191 IPR033464 -
Cmu03g2079 232 SUPERFAMILY ARM repeat 10 135 IPR016024 -
Cmu03g2079 232 FunFam Eukaryotic translation initiation factor 3 subunit K 9 125 - -
Cmu03g2079 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Cmu03g2079 232 SUPERFAMILY Winged helix DNA-binding domain 137 229 IPR036390 -
Cmu03g2079 232 Gene3D - 128 230 IPR036388 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2079 K15028 - csv:101214255 449.899