Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu03g2095 | ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCGACCTTCCCAATCAGAGAAACATTTCACAGAGGACATTTTCCGGGAAAATTCCCAAATTATAAGCTCCGGCGAAATTACTCCGATTTTAAAGCTGCAAAGTCCGGCGTGTCCACCGTCTGTGAACCGCTCCCTCCCGACAGACCGCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTCCCTGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCACAAGCCGAGCTAATGCACGCAAGATGGGCAATGCTAGCCGTGGCCGGAATCCTACTGCCGGAATGGTTCGAAAGCTTAGGATTGATACAAAATTTCTCATGGTACGATGCCGGAGCGCGCGAGTATTTTGCAGACCCGACGACATTGCTGGTGGTGCAATTGGCATTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCAGACTTGGTCAATCCGGGCAGCGTGGATGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAAAGCCAGACGTGGGCTACCCGGGCGGGTTTTGGTTTGACCCCATGATGTGGGGCAGGGGCTCGCCGGAGCCGGTCATGGTGCTACGGACTAAAGAGATCAAGAATGGGCGGTTGGCCATGCTGGCGTTTGTCGGATTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCGCTTGAGAATCTGGCCGCCCACGTGGCTGATCCTGGCCATTGCAACATCTTTTCGGCATTTAGTTCGGGTTCGGGTTGA | 798 | 55.64 | MALSISSTALSTFPIRETFHRGHFPGKFPNYKLRRNYSDFKAAKSGVSTVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGAREYFADPTTLLVVQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 29397058 | 29400083 | + | CmPI595203_03g020950.1 | Cmu03g2095 | 412881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu03g2095 | 265 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 68 | 253 | - | - | |
Cmu03g2095 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 54 | 257 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Cmu03g2095 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 57 | 260 | - | - | |
Cmu03g2095 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 68 | 253 | - | - | |
Cmu03g2095 | 265 | Pfam | Chlorophyll A-B binding protein | 67 | 233 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g2095 | Cmu-Chr3:29397058 | Cmu11g1374 | Cmu-Chr11:25880952 | 1.70E-88 | dispersed | |
Cmu03g2095 | Cmu-Chr3:29397058 | Cmu04g1255 | Cmu-Chr4:27003296 | 1.30E-54 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu03g2095 | K08908 | - | csv:101211430 | 530.406 |