Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2095 ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCGACCTTCCCAATCAGAGAAACATTTCACAGAGGACATTTTCCGGGAAAATTCCCAAATTATAAGCTCCGGCGAAATTACTCCGATTTTAAAGCTGCAAAGTCCGGCGTGTCCACCGTCTGTGAACCGCTCCCTCCCGACAGACCGCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTCCCTGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCACAAGCCGAGCTAATGCACGCAAGATGGGCAATGCTAGCCGTGGCCGGAATCCTACTGCCGGAATGGTTCGAAAGCTTAGGATTGATACAAAATTTCTCATGGTACGATGCCGGAGCGCGCGAGTATTTTGCAGACCCGACGACATTGCTGGTGGTGCAATTGGCATTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCAGACTTGGTCAATCCGGGCAGCGTGGATGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAAAGCCAGACGTGGGCTACCCGGGCGGGTTTTGGTTTGACCCCATGATGTGGGGCAGGGGCTCGCCGGAGCCGGTCATGGTGCTACGGACTAAAGAGATCAAGAATGGGCGGTTGGCCATGCTGGCGTTTGTCGGATTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCGCTTGAGAATCTGGCCGCCCACGTGGCTGATCCTGGCCATTGCAACATCTTTTCGGCATTTAGTTCGGGTTCGGGTTGA 798 55.64 MALSISSTALSTFPIRETFHRGHFPGKFPNYKLRRNYSDFKAAKSGVSTVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGAREYFADPTTLLVVQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29397058 29400083 + CmPI595203_03g020950.1 Cmu03g2095 412881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2095 265 FunFam Chlorophyll a-b binding protein, chloroplastic 68 253 - -
Cmu03g2095 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 257 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cmu03g2095 265 SUPERFAMILY Chlorophyll a-b binding protein 57 260 - -
Cmu03g2095 265 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Cmu03g2095 265 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2095 Cmu-Chr3:29397058 Cmu11g1374 Cmu-Chr11:25880952 1.70E-88 dispersed
Cmu03g2095 Cmu-Chr3:29397058 Cmu04g1255 Cmu-Chr4:27003296 1.30E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2095 K08908 - csv:101211430 530.406