Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2163 ATGAGGTTATCGTCCTCTGCAATTCTTGTCCTCTTTCTCTTCTTTCACCTTCTTCTTTGCTTCGCTACTTTCCCTTCCCTTTCCATTTCCCTCTTAACCGTCACTAAATCCGAGTTGGTGCCCGGCGAGATCAATGCTACTGCCGACTCTAACTCCTCGAGATCCGCCAATGATGACCACAGTTTTGCTAACATAATCGATCGGGCTCTCGAGAGGGAATTCACTGAGAATGAGCAGACTGATGAAGTCGCGGATGCTGGCAGCTTCAACAACAGCGTTGCTGAGAAGCAGGCAGTTTTGGAAACTGTTGCTCGAGTTAAGTCAAAGAAGAATGAATCGAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCCATTTAGATAATGAGAATCGAGCAGAAGACATGCCCACATTAATTGATCGGAAGGACAATGTTTTTATTATATCCAATCCCAAGTCAAAGTATCCCGTGCTCCAATTGGATTTAAGGTTGATTTCAGATCTAGTTGTTGTTATTGTTTCTGCAACTTGTGGTGGCATTGCTTTCGCATGTGCAGGACAACCGGTCTTTACTGGATACCTGTTGGCTGGATCTCTCATTGGACCCGGAGGTTTAAGCTTTGTCAGCGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTGATCTTCCTTCTTTTTGCATTGGGCCTGGAATTCTCCACTACAAAACTTCGTGTGGTTCGAGCAGTGGCTATTCTTGGAGGATTGCTCCAGATTTTCCTTTTTATGTGCTTGTGTGGAATTACAGCTTCGCTATGTGGTGGTAAATCTTCAGAGGGTGTATTTGTTGGTGCATTCTTGTCTATGTCTTCGACTGCAGTGGTCTTGAAATTTTTAATGGAACGCAATAGCGTCAATGCCATTCATGGTCAGGTGACCATTGGTACTCTTATTCTTCAGGATTGTGCTGTTGGCTTGCTGTTTGCGCTGCTTCCGATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCCATGACTAAGTCGTTGGTGGTCCTGATTACGTTTTTGATTATTTTGACAATATTATCTCGTACATGTGTTCCGAGGTTCCTTAAGCTTATGATTAGCTTGTCATCTCAGACTAATGAGCTCTATCAATTGGCAGCTGTTGCATTCTGCTTACTTGTTGCTTGGTGCAGTGATAAACTGGGCTTAAGCCTTGAATTGGGTTCCTTTGCTGCTGGTGTGATGATATCAACTACTGATCTTGCTCAGCATACACTTGAACAGGTTGAGCCCATTCGCAACTTCTTTGCTGCTCTTTTTCTTGCCAGCATTGGGATGCTAATTCATGTTCATTTCCTATGGAACCACATTGATATTTTACTTGCGGCTGTAATATTGGTCATCATTATAAAAACTGTAGTGGTTACTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGGATGTCACTTGCACAAATTGGAGAATTTGCTTTTGTCCTTCTAAGCCGTGCCTCTAATCTCCATCTTGTTGAGGGAAAATTGTATATACTGCTGCTTGGGACAACTGCACTTAGCCTGGTGACTACGCCATTGCTTTTCAAGCTTATTCCTGCCGTGGTACGTATTGGAGTGTTGTTGCGGTGGTTTTCACCTGATGGTTTGAGTGAGATTGGATTCAAAGGAGAGGGCTTTCGAATGGATGGTGCCAAGCGCATTACTTTGGTGGTTCAAGACTCTCACGCAAGATCGTATCAAAATAGTTCCATTGGGATGGAGAACCAGAGTAGTGTGAATACGATTCCTCAAAATCCCATTCACTAA 1836 43.36 MRLSSSAILVLFLFFHLLLCFATFPSLSISLLTVTKSELVPGEINATADSNSSRSANDDHSFANIIDRALEREFTENEQTDEVADAGSFNNSVAEKQAVLETVARVKSKKNESKEEKSFQFHDVFHLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNAIHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLITFLIILTILSRTCVPRFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIIIKTVVVTTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSPDGLSEIGFKGEGFRMDGAKRITLVVQDSHARSYQNSSIGMENQSSVNTIPQNPIH 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30118439 30129346 + CmPI595203_03g021630.1 Cmu03g2163 412949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2163 611 Gene3D - 163 546 IPR038770 -
Cmu03g2163 611 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 47 569 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Cmu03g2163 611 Pfam Sodium/hydrogen exchanger family 173 539 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2163 Cmu-Chr3:30118439 Cmu05g0847 Cmu-Chr5:7610106 4.60E-185 dispersed
Cmu03g2163 Cmu-Chr3:30118439 Cmu08g1635 Cmu-Chr8:28037551 9.10E-234 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2163 K26735 - csv:101208614 1031.55