Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2235 ATGCCGCCTTTCCTTCATTTGCCTTGTTCCCCTCTCAAAAGGTTCATTTCACACACCTCAAAATCCTCCATAAACAATGCCCTGTTCAACCCACAACCCAATCTTCAACCATTTTTCTCATTTCTCCAAGAATTTCCCCATAACATTTTGTCGGTCAAATCCATACACGCCCAGATTATTATCACAAACGCCATATCTGGGGACCAAATTTTGGTTGCAAAGCTTGTTCAGGCGTACTCAGGCTTGGGTTGTTTGGAAAATGCACGGAAAGTGTTTGATAACTTTCCTCAACCAAAAACCCTTCTTTGCAATGCCATGGTTAATGGGTATCTGCAAAATGAGCATTATAATGACAGTATCGAGCTGCTTAAGATGATGAGTCGATGTGATTTGGAATTTGATAGTTATACTTGTAATTTTGCTCTTAAGGCATGCATGTCCTTATTGGATTATGAAATGGGGATGGAAGTGATTAGATTAGCTGTGTGTAGGGGGTTGGCTAGAGGTCGGTTTTTGGGAAGTTCTATTTTGAATTTTTTGGTGAAAACTGGTGATATTATGAGTGCACAATTTTTTTTTCATCAAATGGTTGAGAAAGATGTTGTTTGTTGGAATGTGATGATTGGTGGGTTCATGCAAGAGGGCTTGTTTAGTGAAGGTTATAATGTGTTCCTTGATATGCTTTATAATAAAATTGAGCCCAGTGCTGTGACCATGACAATCTTGATTCAATCCTGTGGGGAGATGAGGAATTTAAAGTTTGGAAAATGTATACATAGCTATGTTCTTGGATTTGGAATGAGTAGTGATACGAGGGTGCTTACCTCATTGATTGATATGTATTGTAAATCGGGTGACGTCGAAAGTGCTCGATGGATTTTCGATATGATGCCCTTGAGGAACTTGGTCTCTTGGAATGTTATGATTTCGGGATATGTCCAAAATGGTTTTCTTGTTGAAACTTTATATCTCTTTCGGATGTTGGTTATGAATGATGGAGGTTTCGATTCAGGTACTGCTGTTAGCCTCATCCAGCTGTGTTCTCGCACGGCTGATTTGGATGGCGGCAAGGTTCTTCATGGTTGCATCTATCGAAGGGGACTTGATTTGAATTTGGTTTTGTCTACTGCAATTGTTGATCTATATGCTAAATGTGGATCCCTGGCCTATGCATCTTCTGTTTTTGAAAGAATGAAAAATAAGAATGTGATTTCATGGACTGCCATGCTTGTGGGACTGGCACAGAATGGGCATGCTAGAGATGCCTTAAAGTTATTTTATCGGATGCAAAATGAGAGAGTTACTTTCAATGCCCTCACCTTAGTTAGTTTAGTCCAATGTTGCGCGCTCCTAGGCTTGTTACGTGAAGGGAGATGTGTGCATGCTATCTTAACTCGATTTCATTTTGCTTCCGAAGTTGTCGTTATAACAGCCCTCATTGATATGTATGCAAAATGCAGCAAAATAAACTCAGCTGAGAAGGTATTCAAGTATGGTTTTACGCCTAAGGATGTGATATTATATAACGCTATGATTTCGGGCTATGGAATGCACGGTCTTGGGCGTAAAGCACTGTGCGTCTACCATCAAATGAATCTAGAAGGACTTCAGCCAAACGAGAGTACCTTTGTTTCTCTGCTATCTGCTTGTAGCCATTCAGGCCTGGTGGAAGAGGGGATCTCTTTGTTTCAAAATATGGAGAAAGATCATGACGTAACACCTACCGATAAACTTTACGCTTGTTTTGTAGATCTTCTATGTCGAGCAGGTCGCCTTCGGCAAGCTGAGGAATTAATCAATCAAATGCCTTTCATACCAACCAGTGGCATACTTGAAACTCTGCTGAATGGATGTCTTTTGCACAAGGACATTGAATTAGGTGTAAAATTTGCTGACAGATTACTCTCCTTGGAGTCTAGAAATCCAAGCATCTACATTACCTTGTCAAATATATATGCCGAAGCAAGTCGATGGGATTCGGTAAAGTATGTTCGAGGTCTCATGACCGAGCAAGAGCTTAAAAAGATTCCAGGATATAGCTCAATTGAAGTAAAAATTCAGTCTCCCAACAGAGCCCACAACAACCACGACAATCAACTGCAAACAATCCACAATTATGATGATCCCAATTTCCCTGTTCTGCTTTCCGGTCGATCGTTTTCTTTGATGGGGTTTTCATGTTTCTTTGTTCTTGTGAGAAAATCTATGAGTGAAGTGCTTCTCCGAGAGGCGTCTTCTAGAGGTGTAGAAGCCCCTGTAGATAAGGGGAAGAGGAATCAAATTACTGAGTCTCGTGTCCAAGGCGAGAGTGTTCAGGAGAAAGAAGTAGAACGTGTGAGTGCTAATGTAGAGGAGCATGTAAACGTGAACAAGGAAGAGGAGCAGAAGGCTGATGGGGTTCAGGAGCGCCCACGAGCAGAACGGAGAAAGTCGAGGAAGGTTCCGAGGCCAACTAACTTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGATGGCCTTCTTGGCTCACGGCAGTTTGTGGAGAGGCTCTCAATGGTTGGATTCCTCGGAAGGCTGATACATTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAAGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTCGGTTTGACAATTTGGAACCTGAAAGTGTGAAATTTATGGCTAGAGAGATTCTTATCCTTAGGAGATTAAATCATAACAATGTTGTGAAATTGGAGGGCTTGGTTACATCACGGATGTCTTGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCAGGTCTTGCTGCAAATCCATCGATCAAATTTACGGAATCTCAGGTTAAATGTTTCATGCAACAACTGCTATCTGGACTGGAACACTGTCATAATCGACGGGTGCTTCACCGTGACATTAAAGGATCTAATCTTCTCATTGATAGTGGGGGAGTGCTTAAAATTGCCGACTTTGGATTGGCTTCTTTCTTTGATCCGAATCACAAGCACCCTATGACTAGTCGGGTGGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCTGAGTTATTAGCTGGGAGGCCTATTATGCCTGGCCGTACAGAGGTGGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAACTTCCAAATGCAACTTTATTTAAGCCCAGAGAACCTTATAAAAGATGTATAAAGGAGACATTTAAAGATTTCCCCCCATCTTCTCTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGCAGAACGAAAGACAGCAACAGATGCATTAAATAGCGAGTTCTTCATGACAGAACCTTTAGCCTGCAAACCCTCCAACCTCCCGAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGATGAAGCTCGGAGACTAAGAGCAGCTAGTAAAGCCCAGGGAGATGGAGCGAAGAAAACACGCACACGTGTTAGGGCTATTCCAGCTCCCGAAGCCAATGCCGAAATACAAACAAATATTGACAGGAGGCGCTTAATTACACATGCAAATGCAAAGAGCAAAAGTGAAAAGTTTCCCCCACCACATCAGGATGGAGCGCTTGGCTTTACGCTAGGATATTCACGTCATATCGACCCATCTGGTGTTCCTCCCGACATACCGTTCAGCTCGACGCTGTTCACTTATTCTAAGGAACCAGTCCAAGCCTGGTCTGGTCCACTAGTCCCTGGTGCTGGCACTGAGGCTCCTAGGCAGAAGAAGCATGTAGGAGGTGTATCATCAAATTCTTCCCACGGTTCATCCAAATTGGTAATCAATCAGCCTGGCCTACTCTCAGCTGAGGAGATCATGAATTGA 3957 42.56 MPPFLHLPCSPLKRFISHTSKSSINNALFNPQPNLQPFFSFLQEFPHNILSVKSIHAQIIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDSVKYVRGLMTEQELKKIPGYSSIEVKIQSPNRAHNNHDNQLQTIHNYDDPNFPVLLSGRSFSLMGFSCFFVLVRKSMSEVLLREASSRGVEAPVDKGKRNQITESRVQGESVQEKEVERVSANVEEHVNVNKEEEQKADGVQERPRAERRKSRKVPRPTNLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHNNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPREPYKRCIKETFKDFPPSSLPLIETLLAIDPAERKTATDALNSEFFMTEPLACKPSNLPKYPPSKEMDARRRDDEARRLRAASKAQGDGAKKTRTRVRAIPAPEANAEIQTNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPSGVPPDIPFSSTLFTYSKEPVQAWSGPLVPGAGTEAPRQKKHVGGVSSNSSHGSSKLVINQPGLLSAEEIMN 1318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30980116 31001048 + CmPI595203_03g022350.1 Cmu03g2235 413021

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2235 1318 MobiDBLite consensus disorder prediction 1150 1189 - -
Cmu03g2235 1318 FunFam Pentatricopeptide repeat-containing protein, chloroplastic 474 700 - -
Cmu03g2235 1318 CDD STKc_CDK9_like 856 1140 - -
Cmu03g2235 1318 Gene3D Phosphorylase Kinase; domain 1 843 938 - -
Cmu03g2235 1318 Pfam PPR repeat 376 403 IPR002885 -
Cmu03g2235 1318 Pfam PPR repeat 477 497 IPR002885 -
Cmu03g2235 1318 Pfam PPR repeat 303 329 IPR002885 -
Cmu03g2235 1318 Pfam PPR repeat 275 300 IPR002885 -
Cmu03g2235 1318 Pfam PPR repeat 581 602 IPR002885 -
Cmu03g2235 1318 Pfam PPR repeat 103 130 IPR002885 -
Cmu03g2235 1318 Pfam PPR repeat 404 433 IPR002885 -
Cmu03g2235 1318 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 402 436 IPR002885 -
Cmu03g2235 1318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 976 988 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g2235 1318 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 270 304 IPR002885 -
Cmu03g2235 1318 MobiDBLite consensus disorder prediction 1276 1303 - -
Cmu03g2235 1318 FunFam probable serine/threonine-protein kinase At1g54610 939 1180 - -
Cmu03g2235 1318 FunFam Pentatricopeptide repeat (PPR-like) superfamily protein 254 352 - -
Cmu03g2235 1318 Gene3D Tetratricopeptide repeat domain 258 332 IPR011990 GO:0005515(InterPro)
Cmu03g2235 1318 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 435 685 IPR050421 -
Cmu03g2235 1318 Gene3D Tetratricopeptide repeat domain 454 555 IPR011990 GO:0005515(InterPro)
Cmu03g2235 1318 Gene3D Tetratricopeptide repeat domain 341 453 IPR011990 GO:0005515(InterPro)
Cmu03g2235 1318 Gene3D Tetratricopeptide repeat domain 168 257 IPR011990 GO:0005515(InterPro)
Cmu03g2235 1318 Gene3D Tetratricopeptide repeat domain 51 167 IPR011990 GO:0005515(InterPro)
Cmu03g2235 1318 Coils Coil 776 803 - -
Cmu03g2235 1318 Pfam E motif 621 683 IPR046848 -
Cmu03g2235 1318 MobiDBLite consensus disorder prediction 748 808 - -
Cmu03g2235 1318 Pfam Protein kinase domain 856 1140 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g2235 1318 Gene3D Tetratricopeptide repeat domain 556 702 IPR011990 GO:0005515(InterPro)
Cmu03g2235 1318 MobiDBLite consensus disorder prediction 743 828 - -
Cmu03g2235 1318 Pfam PPR repeat family 199 246 IPR002885 -
Cmu03g2235 1318 Pfam PPR repeat family 503 551 IPR002885 -
Cmu03g2235 1318 ProSiteProfiles Protein kinase domain profile. 856 1140 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g2235 1318 ProSitePatterns Protein kinases ATP-binding region signature. 862 885 IPR017441 GO:0005524(InterPro)
Cmu03g2235 1318 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 200 234 IPR002885 -
Cmu03g2235 1318 FunFam probable serine/threonine-protein kinase At1g54610 843 938 - -
Cmu03g2235 1318 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 504 538 IPR002885 -
Cmu03g2235 1318 Gene3D Transferase(Phosphotransferase) domain 1 939 1179 - -
Cmu03g2235 1318 SUPERFAMILY Protein kinase-like (PK-like) 851 1144 IPR011009 -
Cmu03g2235 1318 NCBIfam pentatricopeptide repeat 507 540 IPR002885 -
Cmu03g2235 1318 NCBIfam pentatricopeptide repeat 404 435 IPR002885 -
Cmu03g2235 1318 NCBIfam pentatricopeptide repeat 542 575 IPR002885 -
Cmu03g2235 1318 NCBIfam pentatricopeptide repeat 202 235 IPR002885 -
Cmu03g2235 1318 NCBIfam pentatricopeptide repeat 303 329 IPR002885 -
Cmu03g2235 1318 MobiDBLite consensus disorder prediction 1289 1303 - -
Cmu03g2235 1318 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 539 569 IPR002885 -
Cmu03g2235 1318 FunFam Pentatricopeptide repeat-containing protein mitochondrial 354 461 - -
Cmu03g2235 1318 SMART serkin_6 856 1140 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g2235 1318 MobiDBLite consensus disorder prediction 1158 1189 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2235 K08819 - - csv:101213729 1124.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2235 Cmu-Chr3:30980116 Cmu05g1044 Cmu-Chr5:9626629 2.10E-171 dispersed
Cmu11g1887 Cmu-Chr11:30902079 Cmu03g2235 Cmu-Chr3:30980116 2.30E-47 dispersed
Cmu01g1539 Cmu-Chr1:28967087 Cmu03g2235 Cmu-Chr3:30980116 2.10E-118 transposed
Cmu02g2396 Cmu-Chr2:37416799 Cmu03g2235 Cmu-Chr3:30980116 2.90E-96 transposed
Cmu03g0999 Cmu-Chr3:4593933 Cmu03g2235 Cmu-Chr3:30980116 3.30E-191 transposed
Cmu05g0636 Cmu-Chr5:5465101 Cmu03g2235 Cmu-Chr3:30980116 2.10E-232 transposed
Cmu05g2220 Cmu-Chr5:31720131 Cmu03g2235 Cmu-Chr3:30980116 3.20E-59 transposed
Cmu08g0078 Cmu-Chr8:1573914 Cmu03g2235 Cmu-Chr3:30980116 3.40E-154 transposed
Cmu08g0305 Cmu-Chr8:7601633 Cmu03g2235 Cmu-Chr3:30980116 3.90E-120 transposed
Cmu11g0057 Cmu-Chr11:1061686 Cmu03g2235 Cmu-Chr3:30980116 6.80E-167 transposed
Cmu02g1621 Cmu-Chr2:30018491 Cmu03g2235 Cmu-Chr3:30980116 2.90E-242 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g419 . . . . . . . . Cmo10g01167 . . Cma12g01100 . Car12g01072 . Cpe07g00932 Cpe11g00928 . . . . . . . Cla02g01601 . Cec02g1707 Cco02g1754 Clacu02g1673 Cmu02g1621 Cre02g1945 . . . . Lsi06g00186 Csa02g00346 Chy02g01127 Cme05g01749 Blo17g00605 . . Bda08g01030 Bpe05g00263 . . Bma05g00317 . . Cmo12g01117 Cma10g01091 . Car10g00947 . . . Bhi06g01739 . . . . . . Cla03g01582 Cam03g1660 Cec03g1707 Cco03g1705 Clacu03g1683 Cmu03g2235 Cre03g1910 Lsi11g00478 Csa01g02837 Chy05g01169 Cme02g00153
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmu05g2220 . 1 294 Core Cell Cycle Gene Families AT3G48750 85.7 2.1e-151 531.9
Cmu04g0659 . 1 300 Core Cell Cycle Gene Families AT3G48750 56.5 9.6e-96 347.1
Cmu11g1887 . 11 307 Core Cell Cycle Gene Families AT3G48750 53.0 3.4e-93 338.6
Cmu04g0659 . 1 305 Core Cell Cycle Gene Families AT3G54180 84.8 4.7e-154 540.8
Cmu11g1887 . 11 309 Core Cell Cycle Gene Families AT3G54180 66.0 9.3e-118 420.2
Cmu05g2220 . 1 290 Core Cell Cycle Gene Families AT3G54180 54.1 1.8e-92 336.3
Cmu04g0659 . 1 305 Core Cell Cycle Gene Families AT2G38620 71.5 2.7e-123 438.3
Cmu11g1887 . 11 309 Core Cell Cycle Gene Families AT2G38620 57.5 2.9e-93 338.6
Cmu11g1887 . 1 307 Core Cell Cycle Gene Families AT1G76540 84.7 2.3e-156 548.5
Cmu04g0659 . 1 300 Core Cell Cycle Gene Families AT1G76540 66.3 9.5e-118 420.2
Cmu05g2220 . 1 290 Core Cell Cycle Gene Families AT1G76540 53.7 9.5e-94 340.5
Cmu11g1887 . 8 307 Core Cell Cycle Gene Families AT1G20930 89.0 4.5e-160 560.8
Cmu04g0659 . 1 303 Core Cell Cycle Gene Families AT1G20930 67.1 3.5e-120 428.3
Cmu05g2220 . 1 290 Core Cell Cycle Gene Families AT1G20930 55.7 5.4e-97 351.3
Cmu02g2396 . 58 572 Core Cell Cycle Gene Families AT5G10270 75.7 4.8e-220 760.8
Cmu10g2170 . 20 481 Core Cell Cycle Gene Families AT5G10270 77.3 2.2e-209 725.3
Cmu03g2235 . 848 1166 Core Cell Cycle Gene Families AT5G10270 51.6 1.0e-97 354.4
Cmu05g1044 . 123 439 Core Cell Cycle Gene Families AT5G10270 54.7 2.3e-97 353.2
Cmu05g0636 . 105 421 Core Cell Cycle Gene Families AT5G10270 52.9 3.9e-97 352.4
Cmu03g0999 . 93 409 Core Cell Cycle Gene Families AT5G10270 53.2 8.7e-97 351.3
Cmu11g0057 . 150 466 Core Cell Cycle Gene Families AT5G10270 52.1 4.3e-96 349.0
Cmu08g0078 . 137 453 Core Cell Cycle Gene Families AT5G10270 52.7 7.4e-96 348.2
Cmu02g1753 . 193 509 Core Cell Cycle Gene Families AT5G10270 52.0 3.1e-94 342.8
Cmu02g1621 . 101 419 Core Cell Cycle Gene Families AT5G10270 51.0 5.3e-94 342.0
Cmu04g1243 . 119 437 Core Cell Cycle Gene Families AT5G10270 50.1 1.4e-91 334.0
Cmu02g2396 . 122 571 Core Cell Cycle Gene Families AT5G64960 72.9 3.7e-179 624.8
Cmu10g2170 . 84 534 Core Cell Cycle Gene Families AT5G64960 70.9 2.6e-172 602.1
Cmu05g1044 . 177 439 Core Cell Cycle Gene Families AT5G64960 54.3 2.1e-81 300.1
Cmu03g0999 . 147 409 Core Cell Cycle Gene Families AT5G64960 52.9 3.6e-81 299.3
Cmu03g2235 . 902 1166 Core Cell Cycle Gene Families AT5G64960 50.7 8.0e-81 298.1
Cmu02g1753 . 247 509 Core Cell Cycle Gene Families AT5G64960 52.9 1.0e-80 297.7
Cmu11g0057 . 204 466 Core Cell Cycle Gene Families AT5G64960 52.9 1.0e-80 297.7
Cmu05g0636 . 159 421 Core Cell Cycle Gene Families AT5G64960 51.8 3.9e-80 295.8
Cmu08g0078 . 191 453 Core Cell Cycle Gene Families AT5G64960 53.2 3.9e-80 295.8
Cmu02g1752 . 182 444 Core Cell Cycle Gene Families AT5G64960 52.9 3.3e-79 292.7
Cmu06g1507 . 8 414 Core Cell Cycle Gene Families AT1G73690 74.7 6.5e-172 600.5
Cmu06g1507 . 12 342 Core Cell Cycle Gene Families AT1G66750 77.7 2.2e-155 545.4
Cmu06g1507 . 8 415 Core Cell Cycle Gene Families AT1G18040 75.5 4.0e-174 607.8
Cmu04g0183 . 32 478 Core Cell Cycle Gene Families AT5G63610 78.9 7.1e-202 700.3
Cmu11g0226 . 1 481 Core Cell Cycle Gene Families AT4G28980 62.4 2.0e-175 612.5
Cmu08g0545 . 5 498 Core Cell Cycle Gene Families AT1G44110 56.8 2.7e-145 512.3
Cmu09g0226 . 225 503 Core Cell Cycle Gene Families AT1G44110 55.2 1.4e-88 323.9
Cmu05g1751 . 206 472 Core Cell Cycle Gene Families AT1G44110 55.4 1.5e-84 310.5
Cmu05g2098 . 297 576 Core Cell Cycle Gene Families AT1G44110 52.5 1.4e-82 303.9
Cmu08g1563 . 85 373 Core Cell Cycle Gene Families AT1G44110 50.2 1.7e-78 290.4
Cmu08g1228 . 286 547 Core Cell Cycle Gene Families AT1G44110 53.4 1.3e-75 280.8
Cmu09g0226 . 224 499 Core Cell Cycle Gene Families AT1G77390 51.4 3.0e-77 286.2
Cmu05g1751 . 206 472 Core Cell Cycle Gene Families AT1G77390 52.4 2.8e-75 279.6
Cmu05g2098 . 302 574 Core Cell Cycle Gene Families AT1G77390 50.5 2.0e-73 273.5
Cmu08g1228 . 286 543 Core Cell Cycle Gene Families AT1G77390 50.8 9.7e-68 254.6
Cmu05g1751 . 16 484 Core Cell Cycle Gene Families AT5G25380 53.7 5.4e-119 424.9
Cmu08g1228 . 119 559 Core Cell Cycle Gene Families AT5G25380 51.4 7.1e-103 371.3
Cmu09g0226 . 223 503 Core Cell Cycle Gene Families AT5G25380 63.7 5.6e-100 361.7
Cmu08g0545 . 216 491 Core Cell Cycle Gene Families AT5G25380 55.1 4.5e-81 298.9
Cmu05g2098 . 301 569 Core Cell Cycle Gene Families AT5G25380 52.0 2.8e-75 279.6
Cmu02g0698 . 119 344 Core Cell Cycle Gene Families AT5G25380 51.9 1.1e-58 224.6
Cmu05g1751 . 3 422 Core Cell Cycle Gene Families AT5G11300 50.8 1.5e-94 343.6
Cmu08g0545 . 207 436 Core Cell Cycle Gene Families AT5G11300 55.7 1.8e-68 256.9
Cmu05g2098 . 297 513 Core Cell Cycle Gene Families AT5G11300 55.3 7.4e-62 235.0
Cmu08g1563 . 92 307 Core Cell Cycle Gene Families AT5G11300 52.3 3.1e-60 229.6
Cmu02g0698 . 119 286 Core Cell Cycle Gene Families AT5G11300 52.1 6.5e-42 168.7
Cmu09g0226 . 189 503 Core Cell Cycle Gene Families AT1G15570 65.0 2.7e-118 422.5
Cmu08g0545 . 188 495 Core Cell Cycle Gene Families AT1G15570 52.1 3.5e-81 299.3
Cmu02g0698 . 119 348 Core Cell Cycle Gene Families AT1G15570 51.1 3.2e-58 223.0
Cmu09g0226 . 4 503 Core Cell Cycle Gene Families AT1G80370 51.4 2.5e-119 426.0
Cmu08g0545 . 217 496 Core Cell Cycle Gene Families AT1G80370 55.7 1.6e-81 300.4
Cmu05g2098 . 297 574 Core Cell Cycle Gene Families AT1G80370 51.4 9.1e-77 284.6
Cmu08g1563 . 92 370 Core Cell Cycle Gene Families AT1G80370 52.0 2.2e-75 280.0
Cmu02g0698 . 119 349 Core Cell Cycle Gene Families AT1G80370 51.7 2.8e-57 219.9
Cmu08g1563 . 5 372 Core Cell Cycle Gene Families AT5G43080 58.5 8.4e-115 410.6
Cmu05g2098 . 204 577 Core Cell Cycle Gene Families AT5G43080 57.2 1.3e-112 403.3
Cmu08g0545 . 218 498 Core Cell Cycle Gene Families AT5G43080 51.2 2.5e-79 292.7
Cmu05g1751 . 208 477 Core Cell Cycle Gene Families AT5G43080 53.7 5.7e-79 291.6
Cmu09g0226 . 226 503 Core Cell Cycle Gene Families AT5G43080 51.3 5.9e-76 281.6
Cmu08g1228 . 283 561 Core Cell Cycle Gene Families AT5G43080 50.4 1.6e-73 273.5
Cmu08g1563 . 1 372 Core Cell Cycle Gene Families AT1G47210 59.4 4.7e-124 441.4
Cmu05g2098 . 204 577 Core Cell Cycle Gene Families AT1G47210 54.4 1.1e-112 403.7
Cmu09g0226 . 226 498 Core Cell Cycle Gene Families AT1G47210 51.8 7.4e-77 284.6
Cmu05g1751 . 208 477 Core Cell Cycle Gene Families AT1G47210 52.2 1.3e-76 283.9
Cmu08g1228 . 283 549 Core Cell Cycle Gene Families AT1G47210 50.6 6.0e-71 265.0
Cmu05g2098 . 297 578 Core Cell Cycle Gene Families AT1G47220 59.2 4.0e-95 345.1
Cmu08g1563 . 78 372 Core Cell Cycle Gene Families AT1G47220 56.9 6.4e-93 337.8
Cmu05g1751 . 208 474 Core Cell Cycle Gene Families AT1G47220 51.7 6.3e-72 268.1
Cmu05g2098 . 204 577 Core Cell Cycle Gene Families AT1G47230 57.1 2.8e-116 415.6
Cmu08g1563 . 1 372 Core Cell Cycle Gene Families AT1G47230 57.1 1.2e-114 410.2
Cmu02g0698 . 66 352 Core Cell Cycle Gene Families AT1G47230 54.0 1.1e-77 287.3
Cmu08g0545 . 219 500 Core Cell Cycle Gene Families AT1G47230 50.5 1.2e-76 283.9
Cmu09g0226 . 228 498 Core Cell Cycle Gene Families AT1G47230 52.0 1.3e-73 273.9
Cmu05g1751 . 209 474 Core Cell Cycle Gene Families AT1G47230 52.0 2.4e-72 269.6
Cmu04g0623 . 1 449 Core Cell Cycle Gene Families AT4G37490 53.8 9.3e-116 414.1
Cmu04g0623 . 1 342 Core Cell Cycle Gene Families AT5G06150 53.6 6.9e-82 301.2
Cmu02g2241 . 847 1049 Core Cell Cycle Gene Families AT5G06150 63.2 4.9e-64 241.9
Cmu01g2031 . 170 344 Core Cell Cycle Gene Families AT5G06150 54.3 1.0e-45 181.0
Cmu04g0623 . 6 406 Core Cell Cycle Gene Families AT3G11520 57.6 3.9e-105 378.6
Cmu01g2031 . 171 397 Core Cell Cycle Gene Families AT3G11520 52.4 6.9e-62 235.0
Cmu02g2241 . 758 1156 Core Cell Cycle Gene Families AT2G26760 53.3 2.4e-107 386.0
Cmu01g2031 . 8 440 Core Cell Cycle Gene Families AT2G17620 60.0 4.7e-128 454.9
Cmu11g1856 . 167 566 Core Cell Cycle Gene Families AT2G17620 52.2 7.4e-105 377.9
Cmu01g2031 . 24 397 Core Cell Cycle Gene Families AT4G35620 58.7 2.1e-103 372.9
Cmu11g1856 . 160 523 Core Cell Cycle Gene Families AT4G35620 53.4 1.3e-89 327.0
Cmu02g2241 . 882 1108 Core Cell Cycle Gene Families AT4G35620 50.9 4.0e-54 209.1
Cmu11g1856 . 131 566 Core Cell Cycle Gene Families AT1G20610 63.1 1.2e-142 503.4
Cmu01g2031 . 1 440 Core Cell Cycle Gene Families AT1G20610 57.0 3.0e-122 435.6
Cmu11g1856 . 131 463 Core Cell Cycle Gene Families AT1G76310 63.8 1.7e-104 376.3
Cmu01g2031 . 1 336 Core Cell Cycle Gene Families AT1G76310 53.5 6.9e-82 301.2
Cmu02g2241 . 878 1045 Core Cell Cycle Gene Families AT1G76310 52.4 5.9e-41 165.2
Cmu09g1973 . 12 329 Core Cell Cycle Gene Families AT1G70210 65.6 3.2e-111 398.7
Cmu05g2557 . 1 327 Core Cell Cycle Gene Families AT1G70210 63.3 4.5e-105 378.3
Cmu01g1791 . 41 335 Core Cell Cycle Gene Families AT2G22490 54.9 3.9e-83 305.4
Cmu05g1129 . 14 336 Core Cell Cycle Gene Families AT4G34160 52.4 6.1e-79 291.6
Cmu08g1552 . 47 322 Core Cell Cycle Gene Families AT4G34160 50.5 9.1e-67 251.1
Cmu02g0662 . 59 292 Core Cell Cycle Gene Families AT4G34160 52.6 2.6e-61 233.0
Cmu05g2087 . 71 318 Core Cell Cycle Gene Families AT5G67260 51.4 5.4e-65 245.4
Cmu01g1791 . 56 275 Core Cell Cycle Gene Families AT5G65420 60.3 1.1e-69 260.4
Cmu08g1090 . 131 330 Core Cell Cycle Gene Families AT5G65420 55.9 5.4e-61 231.5
Cmu01g1791 . 54 233 Core Cell Cycle Gene Families AT5G10440 59.1 7.3e-56 214.2
Cmu08g1090 . 126 304 Core Cell Cycle Gene Families AT5G10440 53.9 9.3e-51 197.2
Cmu01g1601 . 1 277 Core Cell Cycle Gene Families AT5G27620 67.1 4.3e-104 374.8
Cmu01g1347 . 1 86 Core Cell Cycle Gene Families AT2G27960 91.9 7.4e-44 172.9
Cmu02g2156 . 1 86 Core Cell Cycle Gene Families AT2G27960 90.7 1.1e-42 169.1
Cmu01g1347 . 1 83 Core Cell Cycle Gene Families AT2G27970 85.5 1.4e-39 158.7
Cmu02g2156 . 1 76 Core Cell Cycle Gene Families AT2G27970 92.1 4.0e-39 157.1
Cmu05g2744 . 283 1301 Core Cell Cycle Gene Families AT3G12280 71.9 0.0e+00 1411.7
Cmu09g0583 . 2 486 Core Cell Cycle Gene Families AT1G02970 59.9 1.2e-159 560.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013407 0 0 0 0 0 0 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 1 2 0 0 1 0 1 0 0 18
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75427 PF00069 Pkinase 2.70E-67 CL0016 Cmu PK