Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2269 ATGGATGTTACCAACAATTCAAGAGCACCATCACCACCACGAAAAAATCACTTCCATAACCGCAACAATTCCAAATTCCACCAACATTACCACAACCACAATGCCATTCTCAGCTCAAATTCCTTCCTCATTATCATTGCCTCAATCATCTCCATCACCATTCTCCTTGCCATCTTCTTCCTCATCTTCATGCTTCTCCGCCTCAAATCCGCTCGAAACACTGCCACTGCCGCCGCCTCCACCGCCGCACAATCCACCACATTCATCCCTCACACAACCATCAATTTTGACTCAAGCCCAGAAGTGAAGGGGGGTGGGTGCTTATATGGAGGCAATTCTGGGAGAATTCCTCAGTATAGAATCAGGGGAGTTCAAGTTTTCACTTATAAGGAACTGGAATTGGCTACTGACAATTTTAATGAAGCAAATGTGATTGGAAATGGAAGATTAGGGTTTGTGTACAGAGGAGTTCTTGCAGATGGAGCTGTGGTTGCCATTAAAATGCTTCACAGAGATGGCAAGCAGAGGGAACGTGCTTTCAGAATGGAGGTAGATCTCCTAAGCCGCTTGCACTCTCCTTGTTTGGTGGAATTGCTTGGCTACTGCGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGTACTCTTCATCATCATCTACATAATCCCAACAGTGAATCTCGGCCATTGGATTGGAAAACTAGAATGAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTCCTCCATGAGCATGCAGTTCCATCTGTTATTCATAGAAACTTCAAGTGCACCAATGTTCTACTGGATCAGGATTTCCGAGCCAAGGTGTCGGATTTTGGTTCGGCCAAGATGGGCTCTGACAAGATCAATGGTCAGATATCTACACAAGTCCTGGGAACCACAGGATATCTAGCACCAGAGTATGCTTCAACAGGAAAACTTACAACAAAGTCAGATGTGTACAGCTATGGTGTTGTGCTGCTTGAGCTATTGACCGGTCGAGTGCCAGTTGATATCAAACGGCCGCAGGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAGGCTGACTAATAGAGAAAAAGTAGAGAAAATGATTGACCCAGCTATTCAAGGGAAGTACTCAAAAAAGGATCTAATTCAGGTAGCAGCCATTGCAGCCATGTGTGTGCAGCCTGAAGCCGACTACCGGCCTTTGATGACCGACGTTGTGCAGTCACTGGTTCCTCTAGTTAAGAACCCATCATCGTCGTCTCGATTCTTCAATTGA 1284 45.79 MDVTNNSRAPSPPRKNHFHNRNNSKFHQHYHNHNAILSSNSFLIIIASIISITILLAIFFLIFMLLRLKSARNTATAAASTAAQSTTFIPHTTINFDSSPEVKGGGCLYGGNSGRIPQYRIRGVQVFTYKELELATDNFNEANVIGNGRLGFVYRGVLADGAVVAIKMLHRDGKQRERAFRMEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESRPLDWKTRMRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSSSSRFFN 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31385004 31388021 - CmPI595203_03g022690.1 Cmu03g2269 413055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2269 427 FunFam Receptor-like serine/threonine-protein kinase ALE2 215 426 - -
Cmu03g2269 427 Gene3D Transferase(Phosphotransferase) domain 1 215 424 - -
Cmu03g2269 427 MobiDBLite consensus disorder prediction 1 25 - -
Cmu03g2269 427 ProSiteProfiles Protein kinase domain profile. 139 416 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu03g2269 427 Pfam Protein tyrosine and serine/threonine kinase 143 412 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu03g2269 427 SUPERFAMILY Protein kinase-like (PK-like) 117 412 IPR011009 -
Cmu03g2269 427 CDD STKc_IRAK 145 415 - -
Cmu03g2269 427 FunFam Somatic embryogenesis receptor kinase 1 112 214 - -
Cmu03g2269 427 PANTHER OS01G0750732 PROTEIN 10 417 IPR050885 -
Cmu03g2269 427 Gene3D Phosphorylase Kinase; domain 1 112 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2269 Cmu-Chr3:31385004 Cmu07g0206 Cmu-Chr7:1962706 7.10E-84 dispersed
Cmu03g2264 Cmu-Chr3:31311904 Cmu03g2269 Cmu-Chr3:31385004 1.40E-43 proximal
Cmu07g0316 Cmu-Chr7:3116649 Cmu03g2269 Cmu-Chr3:31385004 5.20E-113 transposed
Cmu03g2269 Cmu-Chr3:31385004 Cmu05g0647 Cmu-Chr5:5533543 1.30E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75431 PF07714 PK_Tyr_Ser-Thr 6.20E-44 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2269 - - - 0.0