Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2275 ATGGCATTCTCTATCTCCTTCCTCAAATCCTCCGCTCTCTTTCTCACCATTCTCTCTGTTTTCATCTTCTTCATCCTCTTCGCTCCCAATCGCTCGCCGGAATCCGCATCCAGAAGGTCCCTCATTGCTGCCGGCGATTTCAATTCCAGTGTCCCTTCGATCCCATCTTGTTCCTCTGTTGAATCTCACTCCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCTTCTTTGATCAAAACCCATCTCTCTCTGTCCCTTTTCTCATCCTCTTTCTTCTCCTCCACTTCTACATCCTCATCAAAACTGCTCAAGATCACTTCTCCATTGTCACTTCCAAGCTTGCCTTTCACCTCAACTTGTCCCCGAGTATGGCCGCCGTGACGCTCTTGGCTTTGGGCAATGGCGCTCCGGATGTGTTCGCATCTGTTGCCGCGGTTCGTGGTGGTCAGTATCGAACTGGGTTCGGTGCAATTCTCTCTGCGGGCACGTTTGTTTCCGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCTCAGTTTGTAAGGGATGTGCTGTTCTATTTGACTGCAGCATTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGTTTTGTTGGGTTCTATCTGTTCTTTGTTGGATTGGTGTTTTGGATGGATTTGAGAATGGATAGTGGGAAAGCTAAGAGTGGGGCTGATATGGGAGTGACTAGAGAAGCTGAAATCTACCATGGTGAGTTGCCTCAAGACTGTGAGATTGGAGAAAGCTACAGAACTGTGGATGAAGGAAAAACCAATTCTGGCTTTTGGGAAGCTCTTCGAATGATCCCAAAAGCATGGGAAGCTCCTGTCTCGTTTCTTCTGAAGCTCACCATTCCCCAACCTGCACCTTCCCAATGGAGCAGATTCTTTACATCCGCGAATATTTCTCTTTGTCCCATTGCTCTTCTATATGCCTGTAACTCATTCATGTCGTTTAACCATCCCATTGCTTTCCTCTTACCGAATACACATTTACCTCTTTGGTTCGTAGTATTCTTAGCAAGCTCCTCTCTTGCAGTTCTGCACTTTGTCATGGAAACTGAACCCCCAAAAACTGAGCAAGTCCCTACTGTGCTTGCAGCATTTGTGATGAGTGTATTTTGGATTTCGACCACGGCTGGGGAACTTCTGAACTGTCTTGCAGCTCTTGGGGTGCTTCTCAAACTCCCAGCAGCTCTACTTGGGCTTACTGTGCTTGCCTGGGGAAATTCAGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCCTTGCTTGCTATGGCTGGATGCTTTGCAGGGCCAATGTTTAACATGCTTGTGGGGCTTGGTACAGCTTTAGTTATACAAACAGCTAACAGTTATCCGGAGGCGTATCAGCTTCAATTTCATATCGGAATCGTGATTGCATTCGTATTCCTACTTTTCAGCCTGATGGGCTCCCTACTTGTAATTATTTGGTACAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGTCTTGTGCTGCTGTACATTGTTTTCATGGCTGCCAGTTTACTGATGGCCAATCTAGACATAAAGCCATCTTATTTCCTCTCTGCTCAACAACCTGAAGGCACTTTTAAGTTGGCATGGTTGTTGGCTTGGAATCTGCTATGA 1710 46.61 MAFSISFLKSSALFLTILSVFIFFILFAPNRSPESASRRSLIAAGDFNSSVPSIPSCSSVESHSDGLVNYLYFHFCFFDQNPSLSVPFLILFLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLRMDSGKAKSGADMGVTREAEIYHGELPQDCEIGESYRTVDEGKTNSGFWEALRMIPKAWEAPVSFLLKLTIPQPAPSQWSRFFTSANISLCPIALLYACNSFMSFNHPIAFLLPNTHLPLWFVVFLASSSLAVLHFVMETEPPKTEQVPTVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPAALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANSYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVIIWYRFRVPRFWGFCLVLLYIVFMAASLLMANLDIKPSYFLSAQQPEGTFKLAWLLAWNLL 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31464098 31467782 + CmPI595203_03g022750.1 Cmu03g2275 413061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2275 569 Gene3D - 121 251 IPR044880 -
Cmu03g2275 569 Gene3D - 318 536 IPR044880 -
Cmu03g2275 569 Pfam Sodium/calcium exchanger protein 91 232 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu03g2275 569 Pfam Sodium/calcium exchanger protein 387 536 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu03g2275 569 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 55 539 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2275 Cmu-Chr3:31464098 Cmu10g2337 Cmu-Chr10:29649757 1.30E-48 dispersed
Cmu03g2275 Cmu-Chr3:31464098 Cmu03g2100 Cmu-Chr3:29429315 9.60E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2275 K13754 - csv:101209909 922.539