Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2293 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTTATCTTCATTTCGATGCCTTTTTCATCGCAGAACTCCCACATTTTGATTGCTAACTCATTGTTGAATACAGCAGAGAGCTTCAATGTTAAAGAGCTAGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGTTTACAATTGGGAAATCAAAGCCCATCAGATCTTTCACCTTTGCCGTCGCCATTGCCGTCTCCATCACCAGCCCCCATTGCTCCTTCTCCTGTTCCTATGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAACTCCGCTTGCACAAGAGCCGACCAGTATACAAACCTAAAAGAAAAGAAGATCCAAAAGAAGGAAGAGTCAGAAAAATTCTTGTCGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGATATGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAAGTCAGAGAGAGGAATCCATGGAGAAGCATTCTGTTAAGAGTGAAAGAGAAGAGAAGACAGCAAGACCAAAATCTGGCCTTGATCTGTTCGATCTCGGTATGCTTGGAATGGATGTAGAAGAACAGACCCATACTTCTGTAAGTGAAAAGGAGTTATCTGTTCATAAAGAGGGGGAAAGGGACCAAGAGACGTTGGATTCAGAATCTGATAATGTAAGTGTTTCTTCAATCAAGGAAATGATGTATGTTCATGAGGAAGATGATAGTAAATCAATACAATGCGTATCTGATGGAACTCATTCCTCACCTGGGGATAGAGTTACTCCTGTTAAATGTTGTTCGTCTGATGATGAGGAATCATTCCATTCTTGTGGTGACTCCAATTTGTCGAATGCTCGCCTTTCAAATGCTTCCGGATCTTCTTCTGCGAATGTGATAACAAATTCTACTTGTTCTGTGCCAACTGTGAACTTATCAAGTAAATTGGAAATACAATGTGATGAATCTAACAAACTATTAACTTCTTACCATTCGCATCTTACCCTTTCTCCTTGTAGTTCAGAACCCAAAATGCAGATGGTTTCCCAATCTGTAGGTTGCCAAAAGAATGTCCCATCTTTATCTCCACCTCCTCCACCGCCACCGCCACCACCACCGCCTCCGCCAGTCACTGATCGCAGTTCATTTTCCTTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCTTCTGCATTGTTAAGATCCTCATCTCCTGCAATGTCAGATTTTTCTTCGTTATCTCAAATACCATGGAATGATTTGCCATCACCTCAAACTGCTACTAAACCTTCACTACCATCATCTGTTATTCCTCCACCCCCTTCTCCACCTCCAAGTTTGAAAACAAACGCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTTGCGGCCAAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTACACCAGATCAATCAATGGTGTGGGACAAGCTAAGATGGAGCTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTTGGCTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGCCCTTCTCCAAGCAAACATATACTAGAGGCAAAAAGACTTCAGAACCTAACCATTCTCTTAAAAGCCCTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGTAGCGGGTTGCGTTTGAGACAACTTGAAGCACTGGTTAAGATGGTACCAACTCAAGAAGAAGAAGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATTAGGTTGTACAGAGAAGTTTGTCATAGCAATTCTGAGAATACCATTCGCCTTCCAAAGAATAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAACCATCTACGGAATTCATTTTCCATACTAGAGGAAGCCTGCAAGGAACTAAGATCCAGCAGACTCTTCCTGAAACTACTAGAAGCCGTGCTAAAAACAGGGAATCGAATGAACGTCGGAACAAGCAGAGGAGGCGCTAGAGCATTTAAACTAGACGCCCTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGCAAAACATCTCTACTCCACTTCGTGGTACAAGAAATAATCCGGTCTGAAGGAATCAGAGTATCGGGTAGCATAATGGGAAAAATAAACCAAAAAAACAAATCAAGAACCGTGGAAGAAAGAGAAAACGATTACCGAAGAATGGGGTTAGATCTGGTATCGGGGTTGAGCACGGAACTGCAGAACGTGAAGCGAGCGGCGACGATCGATCTGAAAGTAGTTGGAAGCTCGAGGGGAAATCTGAATGAGGGAATGGGGAAAATGGAGAAACTGGTGGGGAAGGAGTTGAGTGTGGATGAAAGGAGTGGGAATTTCGTGGAAGCCATGAAAGGGTTTGTGGGCTATGTGAAGAAGAGGATGGAGGAAGTGAGGAAGGATGAAGAAAGGGTAATGTCGAGTGTGAGAGAGATTACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGTTGAGGATTTTTGTGATTGTGAGAGATTTTCTTGGAATGTTGGACAATGTCTGTAAGAGCTTCAAGATTGGAAGTTGA 2697 42.9 MGCVVKCVFMIVIFISMPFSSQNSHILIANSLLNTAESFNVKELERVSGEDESGGNEPFILERVRALLGLKSLQLGNQSPSDLSPLPSPLPSPSPAPIAPSPVPMAAHRVHIHEHSHPHQLRLHKSRPVYKPKRKEDPKEGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKSQREESMEKHSVKSEREEKTARPKSGLDLFDLGMLGMDVEEQTHTSVSEKELSVHKEGERDQETLDSESDNVSVSSIKEMMYVHEEDDSKSIQCVSDGTHSSPGDRVTPVKCCSSDDEESFHSCGDSNLSNARLSNASGSSSANVITNSTCSVPTVNLSSKLEIQCDESNKLLTSYHSHLTLSPCSSEPKMQMVSQSVGCQKNVPSLSPPPPPPPPPPPPPPVTDRSSFSFSSPFSTGSTSSSALLRSSSPAMSDFSSLSQIPWNDLPSPQTATKPSLPSSVIPPPPSPPPSLKTNAYSFKTPPPPPSKLPQFMAFGKEGNLRPKLKPLHWDKVRATPDQSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPSKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGSGLRLRQLEALVKMVPTQEEEAKLLSYEGDIGELGCTEKFVIAILRIPFAFQRIEAMLYRETFEDEVNHLRNSFSILEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKINQKNKSRTVEERENDYRRMGLDLVSGLSTELQNVKRAATIDLKVVGSSRGNLNEGMGKMEKLVGKELSVDERSGNFVEAMKGFVGYVKKRMEEVRKDEERVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31608164 31611258 - CmPI595203_03g022930.1 Cmu03g2293 413079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2293 898 PANTHER FORMIN-RELATED 65 894 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cmu03g2293 898 MobiDBLite consensus disorder prediction 399 424 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 436 484 - -
Cmu03g2293 898 Pfam Formin Homology 2 Domain 494 887 IPR015425 -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 216 244 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 452 466 - -
Cmu03g2293 898 Gene3D Formin, FH2 domain 488 895 IPR042201 -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 378 398 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 79 138 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 357 377 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 84 102 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 357 424 - -
Cmu03g2293 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 502 892 - -
Cmu03g2293 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 489 898 IPR015425 -
Cmu03g2293 898 Coils Coil 650 670 - -
Cmu03g2293 898 SMART it6_source 489 896 IPR015425 -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 436 451 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 112 129 - -
Cmu03g2293 898 MobiDBLite consensus disorder prediction 216 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2293 Cmu-Chr3:31608164 Cmu11g0091 Cmu-Chr11:1440399 1.80E-105 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2293 K28090 - csv:101208374 1410.59