Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2339 ATGTACCACCTGAATTTGGGCTGTGCTCTTGGAAATCGTCTTCCTGGGAACCCTTCCACTGCATTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCCGCCATTTTTGCAAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCCCAAGGGGCTAATCGAGAAAAATGGCTTCAGGCCCTTCCCCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACTGTTGCATCTGTGGGAGATTCACGGTGCATACTAGACACCCAAGGAGGTGTAGTTTCTCTATTGACAGTTGATCATAGGTTGGAGGAAAATGAAGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAACGTTTTTGGCGGGAATGAGGTTGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGGGATACAGATGTAGGAGAATATATTGTCCCAATACCGCACGTTAAGCAAGTGAAGCTTTCTAATGCTGGTGGAAGGCTAATTATTGCTTCTGATGGTATTTGGGATGCATTATCATCTGAAATGGCTGCAAAGTCGTGTCGAGGTTTACCTGCAGAGCTTGCTGCCAAGCTGGTTGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTGGTTGTTGATATTATCCCATCCGAGCAACCTATACTATTACCATCAACTCCAAGGAAGAAGCAAAATGTGCTTACCTCATTCTTTGGAAAGAAATATCAAAACTCTTTGGGTAAATCTGCAAACAAACTTTCAGCTGTTGGTGTTGTGGAGGAATTGTTCGAAGAAGGTTCTGCTATGCTTGCTGAAAGGCTAGGCAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGTGGATCAACCCCCAAACGAAAATTTGTCGATGAACTCGGGGCCTTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGTCCATTCCTCTGTGCAACTTGTCGAAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAATAAAACCTACAATAACCGTTTAG 1155 44.85 MYHLNLGCALGNRLPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGANREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPSTPRKKQNVLTSFFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQVDQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKPTITV 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32028288 32031630 + CmPI595203_03g023390.1 Cmu03g2339 413125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2339 384 Gene3D - 9 258 IPR036457 -
Cmu03g2339 384 SUPERFAMILY PP2C-like 20 253 IPR036457 -
Cmu03g2339 384 ProSiteProfiles PPM-type phosphatase domain profile. 1 253 IPR001932 -
Cmu03g2339 384 SMART PP2C_4 11 251 IPR001932 -
Cmu03g2339 384 SMART PP2C_SIG_2 3 253 IPR001932 -
Cmu03g2339 384 FunFam probable protein phosphatase 2C 5 3 258 - -
Cmu03g2339 384 CDD PP2Cc 15 253 IPR001932 -
Cmu03g2339 384 PANTHER PROTEIN PHOSPHATASE 22 252 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu03g2339 384 Pfam Protein phosphatase 2C 18 236 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2339 Cmu-Chr3:32028288 Cmu05g2311 Cmu-Chr5:32389715 2.00E-154 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2339 - - - 0.0