Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu03g2341 | AATGCTTTGAAGCGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATAATCTTATCACTTCGAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGACCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTTAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTCTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCTTTAGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGGCCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAGAGGGGAAAGGATAGATCTGATCGAGAACTTGTTACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGAACGGTTCTTGAGATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCTCATCGTGCCTTCCAGTTCTGTAAGGTGTATAAAAGAACAACTGAATTTCGCAGATTATGTGAAATTATCCGAAATCATCTTGCTAATCTCAACAAGTACAGAGACCAAAGAGATCGGCCCGACCTTTCTGCTCCAGAGAGCTTGCAATTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACAGAACTTGAGCTCTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCTAAACCATCCTTGATGGTGGTGTATTATGTCAAATTAACAGAGATCTTCTGGATATCGGATTGGAATCTTTACCATGCCTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGATTTACAGCTGATAGCTTCATCTGTTGTTTTAGCAGCTCTTGCAGTGTCCCCCTATGACTCCAAGCATGGTGCTTCTCATTTAGAACTTGAACATGAGAAAGAGCGAAATTTGAGGATGGCGAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGGGCAAATCTTCTTTCTGAACTGGTGTCTAAAGGAGTCCTGAGCTGCGCAACTCAGGATGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTCTTCCCTCTTGATCTTGCAACAAAATTGCAACCCTTACTAAACAAAATATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCCGAAGTGCAATTGTCCCAATATGTTCCGGCTCTTGAAAAACTTGCCACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGTCTATGAAAATTGAGAGTCTATCACAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTTATTGCCATGAAAGTTGATCATTCAAGGAACGTTGTGCTATTTGGCAATTTGGGTATTGAATCCGATGGGCTTCGAGACCACCTGACTGTTCTTGCTGAATCCTTAAACAAAGCAAGAGCTATGATCTCTCCTCCAGTTGGGAAAGCATCAAAAACAGGTGACATATTGCCTGATTTGGCAGATATTGTTGATAAAGAGCACAAAAGGCTGCTTGCTCGGAAATTAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGTCAACTTTTGGAAATGGAACGTGAGGAGGAATCAAAAAGGTTAAAATTACTGAAGATAAGCGAAGAGGCTGAGCAGAAGCGGCTTGCAGCAGAATATGAACAAAGGAAAAACCAACGGCTTCGTAGAGAAATAGAAGAACGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAGGAAGGGAAGCAGGAAGCCAGTTCTTGACTCTGAAAAGTTGACGAAACAAACTTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTACAGAAGCTAGCCAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCTGCAACGTTAATTGAAGCTGCATTTCAGCAACGTTTGCATGAAGAGAGAATGATTCACGAACGTGATCAGCAGCTCGAGGTTGAGCTAAGCAAGCAGCGCCACGAAGGTGACCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCGTGAATCTTCGCCAAGAGGAGTTCAGCAGACGTAGAGCTGAGAGAGAAGAACAGATCAGGCAAGTAATTCAGGCTCGGAAAGCAGAAAGGGAGGCTAAGAGGAAGACAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAGTCCGAGAGGAAAAAGAGAGAAGAAGCTGAACGCAAGGCTAAATTGGATGAAATTGCTGAGAAGCAGAGACAAAGGGAGCGAGAATTGGAAGAAAAGGAAAGACTGCGGAAAGAAATGCTCTTTGGTGGTGGCAGATCAACTGATCCGCCTGCTAGACCTGATGTTGCTACCGGTTCTCAGCCTCTGGAGTCTGGAACCGCTGCTCCTGCTGCAGCAGCCGCCGCCGCCTCCGCCACATCTCCAGCAAAATACGTGCCAAGGTTTCGACGGACAGAAGGCTCTAGCCCTAATGCACCACCACCTGAATCCGATCGATGGGGAAGCAGCAGGCCTAATAATCGACCATCTCAACCGGATAGCTGGCGCAGTGATGACCGTAGACCGGCTCTTGGAAGTTCAAGGTCGTCATGGTCCTCATCCCGAGCTTCTACTCGTTCTAGCACGGACCGTTGA | 2889 | 43.75 | NALKRAEELINVGQKQDALQALHNLITSKKYRAWQKPLERIMFKYVDLCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGERGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDWNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVVLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCATQDVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQSMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVDHSRNVVLFGNLGIESDGLRDHLTVLAESLNKARAMISPPVGKASKTGDILPDLADIVDKEHKRLLARKLIIEKRKEEQERQLLEMEREEESKRLKLLKISEEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKRKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLHEERMIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVVNLRQEEFSRRRAEREEQIRQVIQARKAEREAKRKTIFYVRREEERIRILREEEEARKREESERKKREEAERKAKLDEIAEKQRQRERELEEKERLRKEMLFGGGRSTDPPARPDVATGSQPLESGTAAPAAAAAAASATSPAKYVPRFRRTEGSSPNAPPPESDRWGSSRPNNRPSQPDSWRSDDRRPALGSSRSSWSSSRASTRSSTDR | 962 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 32038145 | 32046886 | - | CmPI595203_03g023410.1 | Cmu03g2341 | 413127 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu03g2341 | 962 | Coils | Coil | 661 | 691 | - | - | |
Cmu03g2341 | 962 | MobiDBLite | consensus disorder prediction | 804 | 853 | - | - | |
Cmu03g2341 | 962 | Coils | Coil | 85 | 112 | - | - | |
Cmu03g2341 | 962 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 937 | IPR027512 | GO:0005852(InterPro) | |
Cmu03g2341 | 962 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 953 | IPR027512 | GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER) | |
Cmu03g2341 | 962 | MobiDBLite | consensus disorder prediction | 942 | 962 | - | - | |
Cmu03g2341 | 962 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 260 | 334 | - | - | |
Cmu03g2341 | 962 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 209 | 260 | - | - | |
Cmu03g2341 | 962 | Coils | Coil | 595 | 634 | - | - | |
Cmu03g2341 | 962 | Gene3D | UVR domain | 209 | 260 | - | - | |
Cmu03g2341 | 962 | Coils | Coil | 724 | 757 | - | - | |
Cmu03g2341 | 962 | MobiDBLite | consensus disorder prediction | 804 | 962 | - | - | |
Cmu03g2341 | 962 | Pfam | eIF3a, PCI domain, TPR-like region | 1 | 399 | IPR054711 | - | |
Cmu03g2341 | 962 | Coils | Coil | 553 | 587 | - | - | |
Cmu03g2341 | 962 | Coils | Coil | 791 | 850 | - | - | |
Cmu03g2341 | 962 | ProSiteProfiles | PCI domain profile. | 308 | 505 | IPR000717 | - | |
Cmu03g2341 | 962 | Pfam | PCI domain | 430 | 500 | IPR000717 | - | |
Cmu03g2341 | 962 | Gene3D | - | 355 | 486 | - | - | |
Cmu03g2341 | 962 | Gene3D | - | 261 | 335 | - | - | |
Cmu03g2341 | 962 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 344 | 486 | - | - | |
Cmu03g2341 | 962 | MobiDBLite | consensus disorder prediction | 908 | 930 | - | - | |
Cmu03g2341 | 962 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 433 | 524 | IPR000717 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g1216 | Cmu-Chr3:6649852 | Cmu03g2341 | Cmu-Chr3:32038145 | 0.00E+00 | dispersed | |
Cmu03g1219 | Cmu-Chr3:6681999 | Cmu03g2341 | Cmu-Chr3:32038145 | 0.00E+00 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu03g2341 | K03254 | - | csv:101209344 | 1502.26 |