Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2368 ATGGTTCTTAAAAGTTTGTTACTTGCTGAATGTGGTGGCTGGTGGGACTTAAATGGTGTGGTGTGTCTCTCTCATTGCCATTTGCGCACGAGGTCCGTGGCATCCCAACGCAGCTTCTCAAGTTTTGGTGAAGTCCTATGTCCAAACTACACTAGGGTGCCTTTGGTTAACAGAAGTGGATTTGACCGGCAATACAAAATGGATTACCGGGGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGGCTATGCTCAGGAGCAGGGATCTCTTGCTGATGACTTTATAGATGACTTTCGCTTGCCCATCAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCAAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAATCTGGAATGAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAAGAAAATATCCAGCGGAAAAAACTTGATGTTGAGGTGGAAGAGACAGAAGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCATAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGCTGGAGCAACAAGAAAGAGCAGCCGAGGCTCCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCGAAAGTAGCACCTGTAGCTTCAGTTTTCGGGAATGATAGCGATGACGAATAG 1098 42.35 MVLKSLLLAECGGWWDLNGVVCLSHCHLRTRSVASQRSFSSFGEVLCPNYTRVPLVNRSGFDRQYKMDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQMLEQQERAAEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32362730 32366825 - CmPI595203_03g023680.1 Cmu03g2368 413154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2368 365 SMART G-patch_5 126 171 IPR000467 GO:0003676(InterPro)
Cmu03g2368 365 Pfam G-patch domain 129 169 IPR000467 GO:0003676(InterPro)
Cmu03g2368 365 ProSiteProfiles G-patch domain profile. 128 173 IPR000467 GO:0003676(InterPro)
Cmu03g2368 365 MobiDBLite consensus disorder prediction 256 286 - -
Cmu03g2368 365 MobiDBLite consensus disorder prediction 256 365 - -
Cmu03g2368 365 MobiDBLite consensus disorder prediction 310 340 - -
Cmu03g2368 365 Coils Coil 286 306 - -
Cmu03g2368 365 ProSitePatterns Zinc finger C2H2 type domain signature. 225 247 IPR013087 -
Cmu03g2368 365 SUPERFAMILY beta-beta-alpha zinc fingers 204 257 IPR036236 -
Cmu03g2368 365 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 67 365 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0796 Cmu-Chr2:9158181 Cmu03g2368 Cmu-Chr3:32362730 1.10E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2368 - - - 0.0