Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g2377 ATGGTGATGGCAAACGAAATTAAATACCTGGTAAAGGCAGGTAAATGTAAGCCACCGACGTCACAGATGACGGACGAGCGCGGGTTTGTGTGGTGGTGGCTGGTATTGGCGTTTGGGATCCGACGGTCAGAAACCGCTTGTGACATCTGGTGCTTTACCCGCTGGAGCAGAGCCATGCCAAAGCCTTTGCTCCTTCTCTTTCTCTTATCACTGCCTTTTACCAAATGGGTTCATGCCTTTCTCCCCTATAACCTCTCTGATTCCTCTCTCTTCGACTCTTATGAAACCTCCTTTGCTGCTACCCTTAAACCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCAGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATTAGGAACTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACTGGAATCCTGAGCAACAGAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCCATGGAAGCATTGAGGGCAGAGGGAATGCGATTTGCTAAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTAGAGACTTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTACATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGATTTTGGAAGCATATGATGGCATGGTCATGGAATCATGTCATATTGTGAAGATAGAAGTAGTAATGGGCACCATTCCTTATGTTTCCCTTCATATTGTGGAAATCATAAACGGTTTCCTCTTCCATCTGTTATATGCTGGTAATCAGGACTTTGGCGTTGCCAATATGTTAGCTGCATTGGTTATAAGTTCAGGAGCAGGAAGGAATCTGCCATCCGTTTGTACGAGCCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCCGCATACGATTCCTGGCAGATACAATCCAGTATAGCCCCACCTTCTCTGGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATAGAGCAGCGGTGAAAGCAATCGATTGTCCCTATCCTTGTGACAGGACTTGCCACCATCTGGCGAAGTCATATTGCAATTTGATTAAGAAGTCAATAAACAAGGAAGAAGAAGCTGCTGAGATGACAAATGTGATCTGCAGTCCTGCAAACTTGTTTCAACATAGAAGAAAGGTTCGTATCATCATCCTCTAG 1725 44.0 MVMANEIKYLVKAGKCKPPTSQMTDERGFVWWWLVLAFGIRRSETACDIWCFTRWSRAMPKPLLLLFLLSLPFTKWVHAFLPYNLSDSSLFDSYETSFAATLKPLMVPLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALRAEGMRFAKQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVGLQILEAYDGMVMESCHIVKIEVVMGTIPYVSLHIVEIINGFLFHLLYAGNQDFGVANMLAALVISSGAGRNLPSVCTSHLDPTSCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLAKSYCNLIKKSINKEEEAAEMTNVICSPANLFQHRRKVRIIIL 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32479418 32485465 - CmPI595203_03g023770.1 Cmu03g2377 413163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g2377 574 Pfam Pectinacetylesterase 103 308 IPR004963 GO:0016787(InterPro)
Cmu03g2377 574 Pfam Pectinacetylesterase 360 513 IPR004963 GO:0016787(InterPro)
Cmu03g2377 574 PANTHER NOTUM-RELATED 103 309 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2377 Cmu-Chr3:32479418 Cmu05g0919 Cmu-Chr5:8329309 3.20E-111 dispersed
Cmu03g2377 Cmu-Chr3:32479418 Cmu04g0857 Cmu-Chr4:23101855 3.30E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g2377 K19882 - csv:101218273 480.715