Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g0565 CTGGATCCGACTCCCGAAGCACCGCAGTCCTTGAAGGCTCCCGCTGCCTCCAATTCCACCGGAAACGGTCAGATCCGTTACCGATCTCCGTCTTCCGCCGAGCTTCTTGAAGGCCAATCCGCCTCTCTTCCACTTCAAGATCAACAGAAGCTACTTCAGTTGGAATTTGACAAGATGCATAAACGTTCCGGGAAGCAACAGTCGGAATCGTTGTCTAACAAGATCTATAGATTCAGAGGGGTGTTGTTGCTTACCTCTCTTTCTCTTTTCTTAATCGCCTTTGTTCTTTATCTCATGCCGGCCCGTGAGGATTACTCCTTCAACCACCGCAAAGTTTCCCCTGATCACAGGTCTTCTTCTTCCAAGACTTCTTTTGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGTGTCCATGTCTTTTGCTTTGATCATAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTCGAACAACTTAAACCAGGACTGAGTGCATATGCTGACAGCCCCAAGGATGCTGCAGCATCTCTAATTTCCCTCTTGGACAAAGCTCAAAACGTGGTTCCAAAAGGGCTGCGGCCAATGACCCCCGTTAGAGTTGGGGCAACTGCTGGCTTGAGGGCTCTGAAAGGTGATGCATCTGATAGAATTCTGCAGGCGGTGAGGGATCTCCTGAGAGACAAAAGTGACCTCAGGTTGGAGGGAGATGCCGTCTCTGTGATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACGTTAAACTATCTGCTTGGGAACTTGGGTAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGTGGAGGATCTGTTCAAATGGCATATGCTATCTCGGAAAAGGATGCTGCTCGATTATCAGATGCCGAGAGTGCATACGTCAAAAAGATGTATCTGAAGGGAGCAACTTACTATCTCTATGTTCACAGTTATTTGCATTATGGGTTACTAGCTGCTCGAGCAGAGGTTTTGAGTGTCTCTGAAGATTCTAGCAATGATTGCATCCTATCTGGCTACGAAGGTGAATACCATTACGGAGGAAAGGACTACAAAGCATCTGCCTCTTCATCAGGGTCTAGCTTGAATGGATGCAGGAGTTCAGTTTTGAAGGCCCTCAAGGTTAATGAATCCACATGTACTCACATGAAGTGCACTTTTGGTGGTGTTTGGAATGGCGGAGGAGGAGACGGCCAGAAGAATCTCTTCGTTGCTTCATTTTTCTTTGACAGGGCGGCTGAGGCTGGTTTTGCTGACCCCAATAAGCCGGTTGCTAAAGTTCGCCCAGCAGACTTCAATGATGCAGCGAAGCAGGCATGCCAAATCAAAGTCGAGGACGCCAGTACATATCCCAATGTCGAGAAGGATAACCTGCCGTATTTGTGTATGGATCTTGTGTATCAGTACACACTCCTTGTAGATGGATTCGGGCTGGATCCCTGGCAAGAGATCACATTGGTGAAGAAGGTTAAATATCAGAACTCCTTGGTGGAAGCAGCATGGCCTCTAGGCAGTGCCATCGAAGCTGTCTCGTCGTTAGCCTAA 1572 47.65 LDPTPEAPQSLKAPAASNSTGNGQIRYRSPSSAELLEGQSASLPLQDQQKLLQLEFDKMHKRSGKQQSESLSNKIYRFRGVLLLTSLSLFLIAFVLYLMPAREDYSFNHRKVSPDHRSSSSKTSFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAYADSPKDAAASLISLLDKAQNVVPKGLRPMTPVRVGATAGLRALKGDASDRILQAVRDLLRDKSDLRLEGDAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDAARLSDAESAYVKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSEDSSNDCILSGYEGEYHYGGKDYKASASSSGSSLNGCRSSVLKALKVNESTCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPVAKVRPADFNDAAKQACQIKVEDASTYPNVEKDNLPYLCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19074799 19079816 - CmPI595203_04g005650.1 Cmu04g0565 414150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g0565 523 MobiDBLite consensus disorder prediction 11 27 - -
Cmu04g0565 523 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 244 259 IPR000407 GO:0016787(InterPro)
Cmu04g0565 523 CDD NBD_sugar-kinase_HSP70_actin 127 307 - -
Cmu04g0565 523 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 77 519 IPR000407 GO:0016787(InterPro)
Cmu04g0565 523 MobiDBLite consensus disorder prediction 1 27 - -
Cmu04g0565 523 FunFam Apyrase 1 245 500 - -
Cmu04g0565 523 Gene3D - 125 516 - -
Cmu04g0565 523 Pfam GDA1/CD39 (nucleoside phosphatase) family 119 521 IPR000407 GO:0016787(InterPro)
Cmu04g0565 523 Gene3D Exopolyphosphatase. Domain 2 245 500 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1661 Cmu-Chr3:19890959 Cmu04g0565 Cmu-Chr4:19074799 4.90E-46 dispersed
Cmu03g1662 Cmu-Chr3:19899659 Cmu04g0565 Cmu-Chr4:19074799 6.80E-91 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g0565 K14641 - csv:101220305 865.144