Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g0632 ATGGACGGAAAGGGAAATGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTCCAATTTGGCTATGCTGGCATGAACATCATCACCAAGGTAGCTCTCAACCGTGGAATGAGCCATTACGTTCTCGTCACCTATCGACAAGCTTTTGCCACGGTTGCCCTCGCTCCTTTCGCCTTCTTCCTTGAAAGGAAAGTGAGACCCAAAGTTAGTTTCCCTATGTTGATGCAGATTTTCCTTCTGGGTTTGTTAGGGCCAGTGATTGATCAAAACTTTTATTATGCTGGACTGAAGCTCACTTCTCCTACCTTTGCATGTGCCATGAGCAATATGCTTCCTGCAATGACATTCATCTTGGCTCTTCTTTGTAGGATGGAGAAATTGGAGATGAAGAAAGTGAGATGCCAAGCAAAGGTGGTGGGAACATTGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCTCACCATAATTATCTTCACTCAACTACTTCTTCCAATTACTACTCTTTTGAAAGCACTTATCAAGATTGGGTAAAGGGTTCCATTCTTCTCCTTTTTGCCAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGGAATTACACAGCCCATCTTTCTCTTACAACCCTTGTGTGCTTCTTTGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAAAACAAAGCTTCTGTATGGAACATTGGATGGGACATGAATCTTCTTGCTTCTGTTTATGCTGGAATAGTTTCATCAAGCATAGCTTATTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTTTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCATAATGGGCTCCTTCATGCTTGCTGAGAAGATGTATATCGGACGTGTTGTTGGAGGTGTTGTAATGGTGGTGGGGCTGTACTCGGTGCTATGGGGGAAATACAAAGATTACAAAGAAAAGGAAGCAATAATAGAAGAAAGCACCATGGTTGAACCAGTGAAGCTTTTAATAAGTGGAGGCAAATTAGTTGAGAATAAGAAGAAAAAATTAGCAACAGTGGTTGAAGAAGAAGAAGAAGAAACGACATCAACATCATCAAACGACATTGAAATGCAAAGGAACAACACAACATCAAATGTCGACAATAATAATGTTTCAAAATTGCCTTGTCCTCCTCCACTACCCATTATTGTTGTTGTAGCTATGGATGAAGCACCACCAAAAGTTTGA 1299 41.34 MDGKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATVALAPFAFFLERKVRPKVSFPMLMQIFLLGLLGPVIDQNFYYAGLKLTSPTFACAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTLVTVGGAILMTLYKGNVISFFWSHHNYLHSTTSSNYYSFESTYQDWVKGSILLLFANLAWALFFILQAMTLRNYTAHLSLTTLVCFFGTLQSMAVTFVMENKASVWNIGWDMNLLASVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLAEKMYIGRVVGGVVMVVGLYSVLWGKYKDYKEKEAIIEESTMVEPVKLLISGGKLVENKKKKLATVVEEEEEETTSTSSNDIEMQRNNTTSNVDNNNVSKLPCPPPLPIIVVVAMDEAPPKV 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20118561 20122504 + CmPI595203_04g006320.1 Cmu04g0632 414217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g0632 432 MobiDBLite consensus disorder prediction 380 409 - -
Cmu04g0632 432 MobiDBLite consensus disorder prediction 388 409 - -
Cmu04g0632 432 PANTHER WAT1-RELATED PROTEIN 19 367 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu04g0632 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Cmu04g0632 432 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
Cmu04g0632 432 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0632 Cmu-Chr4:20118561 Cmu10g2382 Cmu-Chr10:30243126 8.40E-125 dispersed
Cmu01g1043 Cmu-Chr1:16141714 Cmu04g0632 Cmu-Chr4:20118561 2.90E-68 transposed
Cmu02g1471 Cmu-Chr2:28480547 Cmu04g0632 Cmu-Chr4:20118561 1.00E-70 transposed
Cmu06g0677 Cmu-Chr6:7731567 Cmu04g0632 Cmu-Chr4:20118561 4.00E-72 transposed
Cmu06g1064 Cmu-Chr6:19942021 Cmu04g0632 Cmu-Chr4:20118561 4.30E-64 transposed
Cmu07g0963 Cmu-Chr7:24236864 Cmu04g0632 Cmu-Chr4:20118561 2.50E-48 transposed
Cmu08g0646 Cmu-Chr8:18673879 Cmu04g0632 Cmu-Chr4:20118561 6.30E-65 transposed
Cmu11g1324 Cmu-Chr11:25447424 Cmu04g0632 Cmu-Chr4:20118561 3.20E-121 transposed
Cmu10g2381 Cmu-Chr10:30238111 Cmu04g0632 Cmu-Chr4:20118561 2.60E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g0632 - - - 0.0