Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g0792 ATGGGGGAATTAGATCAAGTGCAGGTATTTGGTGGATGGATGAGTCCCTTTAGCCGTAGAGTGGAGTTGGGTTTGAAACTCAAAGCCATAAAATATGAATATATTGAGGAAGACTTGAAGAATAAGAGCCATTTGCTTCTGAAATACAATCCAATTTACAAGAAGGTTCCTGTGCTCATTCACAATGGAAACCCCATTTCAGAGTCGATTATCATCCTTGAATACGTTGATGAAGTCTGGAATTCAGTTTACCCTTTCTTCCCTCAAGATCTCTATCAAAGAGCTCAAGCAAGGTTTTGGGCTAAGTTTATCGATGACAAGGTTGTGGCTGCTATACTGAAAGCTGCTCGAAGCAAAGGAGAAGAGAGAGAGAAGGCTATAGAAGAAACAGAGAAAACATTAGAACCACTTGAGAAGGAGCTTGAAGGCAACAAGTTTTTTGGAGGAGAGAAAATTGGATTTGTGGACATTGTTGGGATTGTAGTAGCCTATTGGGTTCCTGCCATTGAAGAAGCTTTTGGATTTCAGCTGTTGACAAGTAACAATAAGTTTCCAAATTTAAGCAAATGGAGTGAAGAGATTGTGAACCACAACCTGGTCAAACAGTTTCCAGCGGCTTACGCAGTGGCTTACGGCACTCTTAGCCTCCGCCACAAGAAATTGAAACAAAGTCGGCGAGTGGAGTTAGCTCTCAAACTCAAAGGCGTCGAATACCAATACTTTGAGGAAGATTTACCCCACAACAAGAGCCATTTGCTGCTGAAATACAATCCAATTTACAAGAAAGTGCCTGTTCTACTCCACCATGGAAAACCCATTGCAGAGTCTCTTGTAATCCTTGAATACATTGATGAAATCTGGAAAACCAATCCCATTTTACCCCAACATCCCCATCAAAGAGCTCTTGCCAGGTTCTGGGCTAAGTTTATCGATGACAAGGTTGTGTGTGCAGTAGTGAAGGCTGCTGGAAGCAAAGAAGAAGAGAGAAAGAAAGCTATAGAGGAAGCAAGGGAGGCATTGGAAGCACTTGAGAAAGAGCTTAAAAGCAACAACTTCTTTGGAGGAGAAGAAATTGGGTTTGTGGACATTGTTGGGACTGTGATAGCTGGTTGGGTTCCTGCCATTGAAGAATGCTTTGGGTTTGAGCTGCTCACAACTAATAACTTCCCTAACCTAATCAAATGGAGTGAACAGCTTCTTAACCATGCTGTTGTAAACCAGATTCTGCCTCCAAAAAATGAGATTGTTTCCTTTATGCAAGCTAATTGGAAAGTTCGAAACTAA 1284 41.67 MGELDQVQVFGGWMSPFSRRVELGLKLKAIKYEYIEEDLKNKSHLLLKYNPIYKKVPVLIHNGNPISESIIILEYVDEVWNSVYPFFPQDLYQRAQARFWAKFIDDKVVAAILKAARSKGEEREKAIEETEKTLEPLEKELEGNKFFGGEKIGFVDIVGIVVAYWVPAIEEAFGFQLLTSNNKFPNLSKWSEEIVNHNLVKQFPAAYAVAYGTLSLRHKKLKQSRRVELALKLKGVEYQYFEEDLPHNKSHLLLKYNPIYKKVPVLLHHGKPIAESLVILEYIDEIWKTNPILPQHPHQRALARFWAKFIDDKVVCAVVKAAGSKEEERKKAIEEAREALEALEKELKSNNFFGGEEIGFVDIVGTVIAGWVPAIEECFGFELLTTNNFPNLIKWSEQLLNHAVVNQILPPKNEIVSFMQANWKVRN 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22470600 22474616 + CmPI595203_04g007920.1 Cmu04g0792 414377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g0792 427 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Cmu04g0792 427 CDD GST_C_Tau 92 202 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cmu04g0792 427 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 296 425 IPR010987 -
Cmu04g0792 427 CDD GST_C_Tau 297 421 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cmu04g0792 427 Pfam Glutathione S-transferase, C-terminal domain 101 197 IPR004046 -
Cmu04g0792 427 Pfam Glutathione S-transferase, C-terminal domain 306 401 IPR004046 -
Cmu04g0792 427 CDD GST_N_Tau 7 80 - -
Cmu04g0792 427 Gene3D Glutaredoxin 221 292 - -
Cmu04g0792 427 FunFam Tau class glutathione S-transferase 1 89 - -
Cmu04g0792 427 Coils Coil 322 350 - -
Cmu04g0792 427 SUPERFAMILY GST C-terminal domain-like 78 209 IPR036282 -
Cmu04g0792 427 SUPERFAMILY Thioredoxin-like 224 314 IPR036249 -
Cmu04g0792 427 Coils Coil 113 133 - -
Cmu04g0792 427 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 223 IPR010987 -
Cmu04g0792 427 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 204 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cmu04g0792 427 SFLD Glutathione Transferase (cytosolic) 225 422 IPR040079 -
Cmu04g0792 427 SFLD Glutathione Transferase (cytosolic) 5 221 IPR040079 -
Cmu04g0792 427 Gene3D Glutaredoxin 4 89 - -
Cmu04g0792 427 Gene3D - 293 426 - -
Cmu04g0792 427 CDD GST_N_Tau 224 287 - -
Cmu04g0792 427 Pfam Glutathione S-transferase, N-terminal domain 225 285 IPR004045 -
Cmu04g0792 427 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Cmu04g0792 427 SUPERFAMILY GST C-terminal domain-like 285 424 IPR036282 -
Cmu04g0792 427 Gene3D - 90 220 - -
Cmu04g0792 427 SFLD Main.3: Omega- and Tau-like 225 422 IPR045073 -
Cmu04g0792 427 SFLD Main.3: Omega- and Tau-like 5 221 IPR045073 -
Cmu04g0792 427 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 211 291 IPR004045 -
Cmu04g0792 427 FunFam Tau class glutathione S-transferase 293 426 - -
Cmu04g0792 427 FunFam Tau class glutathione S-transferase 87 223 - -
Cmu04g0792 427 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0792 Cmu-Chr4:22470600 Cmu04g0804 Cmu-Chr4:22556601 6.50E-77 dispersed
Cmu04g0792 Cmu-Chr4:22470600 Cmu04g0793 Cmu-Chr4:22477233 7.90E-51 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g0792 K00799 - rcu:8279820 353.214