Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu04g0805 | ATGACGGAACAACTGCAGGTGTTTGGTTGTAGGTTAAGTCCGTTCAGTCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGGCATAAAATACCAATATGTGGAGGAAGACATACCCAACAAAAGCCATTTGCTTCGGAAATACAATCCACTTTACAAGAAGGTTCCTGTGCTCGTCCATAATGGAAACCCCATTGCTGAGTCTCTTGTCATCCTTGAATACATTGATGAGCATTGGAAAACCAATCCCATCTTGCCCCAGCATCCTCGGGAAAGAGCTCAAGCAAGATTTTTGGCCAAGTATATTGATGACAAGTTTTTTGGTGCGTGGAGGAAAGCTGTTAGAAGTCAAAGAGAAGGGAGAGAGAAGGTTGTGAAGGCTGTGGAGGAAGCATGCAAGGCGTTGGAAGCAGTTGAGAATGAGCTTAAAAGCAACAATAAGTTCTTTGGAGGAGACAACATTGGGTTAGTGGACATTGTAGGCATCTTCATAGGCTATTGGGTTCCTATCATGCAAACAGCTCTTGGGTTTGAGATTCTGAGCAGCCACAGGTTCCCAAAACTAAGTAAATGGAGTGAAGATCTTACGAGCCATAGCGTTGTGAAGGAGATTCTCCCTCCAAAACCTGACCTTTTTGCTTATACTCAAACTCGTCTTCTATCCAAAAATCTGGGTTCTAAGCTGTGA | 684 | 44.01 | MTEQLQVFGCRLSPFSRRVELALKLKGIKYQYVEEDIPNKSHLLRKYNPLYKKVPVLVHNGNPIAESLVILEYIDEHWKTNPILPQHPRERAQARFLAKYIDDKFFGAWRKAVRSQREGREKVVKAVEEACKALEAVENELKSNNKFFGGDNIGLVDIVGIFIGYWVPIMQTALGFEILSSHRFPKLSKWSEDLTSHSVVKEILPPKPDLFAYTQTRLLSKNLGSKL | 227 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 22563100 | 22565053 | - | CmPI595203_04g008050.1 | Cmu04g0805 | 414390 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu04g0805 | 227 | Gene3D | - | 84 | 222 | - | - | |
| Cmu04g0805 | 227 | SUPERFAMILY | GST C-terminal domain-like | 76 | 216 | IPR036282 | - | |
| Cmu04g0805 | 227 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 5 | 215 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
| Cmu04g0805 | 227 | Coils | Coil | 120 | 144 | - | - | |
| Cmu04g0805 | 227 | Pfam | Glutathione S-transferase, C-terminal domain | 114 | 195 | IPR004046 | - | |
| Cmu04g0805 | 227 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
| Cmu04g0805 | 227 | Gene3D | Glutaredoxin | 1 | 83 | - | - | |
| Cmu04g0805 | 227 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
| Cmu04g0805 | 227 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
| Cmu04g0805 | 227 | SFLD | Main (cytGST) | 2 | 217 | - | - | |
| Cmu04g0805 | 227 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 216 | IPR010987 | - | |
| Cmu04g0805 | 227 | CDD | GST_N_Tau | 5 | 78 | - | - | |
| Cmu04g0805 | 227 | FunFam | Tau class glutathione S-transferase | 1 | 87 | - | - | |
| Cmu04g0805 | 227 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - | |
| Cmu04g0805 | 227 | CDD | GST_C_Tau | 88 | 217 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu04g0805 | Cmu-Chr4:22563100 | Cmu05g0272 | Cmu-Chr5:2315138 | 1.40E-49 | dispersed | |
| Cmu04g0804 | Cmu-Chr4:22556601 | Cmu04g0805 | Cmu-Chr4:22563100 | 5.80E-66 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu04g0805 | K00799 | - | csv:105435246 | 258.07 |