Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu04g0856 | ATGGGTAATCGTATTGGGAAGATTGGCCACTGTTTCGCCGGCGCCGGCGATATTTCCCGCCGTTATGATCCCGCCGACATTATCTCCGACCCACACGACGGGGGTTTCGGTCATTCCTTTTACTACCTCCCACCCGAACCACATACCCTCTCCTCCTCCAAAGATTTCTCCGACGACTACATCTCTCCGGCGACCATTTTCCGGTCTATTTCCGGCGCCTCTGTGAGTGCCAACGTCTCAACGCCGCTCTCCACTTCTCTTGTCGATCTCTATCCTTACAGCACGACGTTTGATCGGGCCGCAGCTTTCGATTGCTCGAATTCCTTCGCCTCCGTGCCGTTGCAGCCGGTGCCTCGCCAGTCGGTGTCGGGAAATTCCGGCGGATTCCCTTCTTCGGGTCCACTGGAGAGAGGGTTTTTATCTGGACCTTTGGCCGCCAGGACCTTCGAATCGGGTCCGATTGATCGAGTGGTTTATTCCGGTCCGATTGAGAAGGGTGGTGGACCCGAGAAATTGCAAAGGAACGTCTCTCATGGCGGCGTCGGAGACAGAGAACCGAAATCGAAAAGAAGAAGAAGAAGAAGAAGTCTTATTCGGATTCTGAAGAGAGCCATATCCAAAACCATTTCTCGAAACCAGAAGGCAGCGACTAAGAGAGTGAGAGAATCGGAATCGTACAAGCATAATGAAAATGCTGCAGCTTCTGCAGCTCAGACTCAGAGCAGTGTCCATTTGAGCAGCCATGCGAGCTTGGCTCAGGAAGACGACGGCGATTATTTTCTCGGCGGTCAGAGCGTGCAGTGGGCGCAGGGGAAAGCCGGTGAGGATAGAGTTCACGTGGTGATATCGGAGGATAATGGTTGGGTTTTCGTCGGAATTTATGATGGATTCAACGGCCCTGATGCTCCTGATTACTTACTTGCTAATCTCTACACTGCCGTTCTTAAAGAACTCAAGGGTTTGATTTGGAGTGATAAGTTTGATTCGACTGCAACTTCATCTTCCATGAACTCATCCAACTCTGCTTCAATTGAGGAAGACGATCATGGAACAACTCACATGAAAAATCAGGAGAATGATCATCAATCGACAGAGAACTTCTCAGCACAAAATGGGGTTGTGAATTTGGAGGCTGATTCAGTGAGGACAAGAGAGAGAGTTTATAATACGAACTATAGGACGAGTCAGCTGATGAAGAAGGCTGATCAGAATCCAAAGAATTGGAAATGTGAATGGGAAAGGGAAAGATTAGGATTAGAGGGGAAGTTGAACAATAGACAATTAGATCACCACCAAATATGGGATGAATCAACAGCAATCAATCATTCCGAGGTGTTGAATGCTCTGTCTCAAGCTTTGAGAAAAACAGAGGAAGCATATCTGCAGAATGCAGACAAGATGGTCACAAGAAATCCTGAGCTAGCTCTTATGGGTTCTTGTGTTTTGGTTATGTTGATGAGAGGAGAAGATGTCTACTTGATGAATGTAGGAGACAGCCGCGCAATTGTAGCACAGCAATTTGAACCGGATTTCGGGACTGGAAAGCCATACAGAGACTTAGAGAGAATCAACGAAGGAACACTACGAGTATTTGAATCCTCTAATGGAGTAGAGTTTGAAAGATTAAAAGCCTTGGCTTCCCATCAGCTTACGATGGACCACAGCACTTACACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCTGATGACGCTTCCGCAATTATGAATGACAGGGTAAAAGGTTATTTGAAGATCACGCGGGCGTTCGGAGCTGGCTTTCTGAAACAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATTCACCTTACATCACCTGTGATCCAACTCTGTGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATATTGTCCTCTGATGGACTCTACCAGTACATTACCAATGAAGAAGCTGTTGCTCAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGACCCTGCTCAAAATCTAATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCACGATGACGTTTCGGTTTTCTCTCTAAAATATTCTTGGAAATGGAAGTCTTGGCCAGATTGCAAAAGCATCCATCACAGGCTGAGTTGTTCATTTGGCAATGGAAAAAGTAGGGAGACAAAGGTAAGTGCCGCCCGCCAAATGCTGTGGAGAAGGAATAGATTGAACATAATGAGATATAAACTTAATACACCCCTTCACTTTCTCCCCACCCCACCACACATTCCAATATTGGAGAAGGCTCCTGAGAAATTTGGAAGTTCTTGGTCAGTTTCAAGGCTATGGAATTCTACTGTTGAATTCAAAAGGCAATATATGATTGATTTCTATGATGTTGGAGACAGACTCGTCTCCCTTCAACAGGAGCAGAAAGGCAGGGAGAACATCAGATCTTGTATGAAGCTTGTCTATGATGGTGTCTGTTACTATCATAAATCCATGGAAAGGAGGACCAGCACATCTCTTTTGACTTTTGCCACCGATGGATATTGA | 2604 | 46.08 | MGNRIGKIGHCFAGAGDISRRYDPADIISDPHDGGFGHSFYYLPPEPHTLSSSKDFSDDYISPATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRQSVSGNSGGFPSSGPLERGFLSGPLAARTFESGPIDRVVYSGPIEKGGGPEKLQRNVSHGGVGDREPKSKRRRRRRSLIRILKRAISKTISRNQKAATKRVRESESYKHNENAAASAAQTQSSVHLSSHASLAQEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYTAVLKELKGLIWSDKFDSTATSSSMNSSNSASIEEDDHGTTHMKNQENDHQSTENFSAQNGVVNLEADSVRTRERVYNTNYRTSQLMKKADQNPKNWKCEWERERLGLEGKLNNRQLDHHQIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQFEPDFGTGKPYRDLERINEGTLRVFESSNGVEFERLKALASHQLTMDHSTYTEEEVQRIKNAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYITNEEAVAQVESFIASFPEGDPAQNLIEEVLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVFSLKYSWKWKSWPDCKSIHHRLSCSFGNGKSRETKVSAARQMLWRRNRLNIMRYKLNTPLHFLPTPPHIPILEKAPEKFGSSWSVSRLWNSTVEFKRQYMIDFYDVGDRLVSLQQEQKGRENIRSCMKLVYDGVCYYHKSMERRTSTSLLTFATDGY | 867 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23096116 | 23101675 | + | CmPI595203_04g008560.1 | Cmu04g0856 | 414441 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu04g0856 | 867 | PANTHER | PROTEIN PHOSPHATASE 2C | 240 | 712 | IPR015655 | GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro) | |
Cmu04g0856 | 867 | MobiDBLite | consensus disorder prediction | 209 | 248 | - | - | |
Cmu04g0856 | 867 | MobiDBLite | consensus disorder prediction | 361 | 375 | - | - | |
Cmu04g0856 | 867 | MobiDBLite | consensus disorder prediction | 229 | 248 | - | - | |
Cmu04g0856 | 867 | MobiDBLite | consensus disorder prediction | 330 | 345 | - | - | |
Cmu04g0856 | 867 | SUPERFAMILY | PP2C-like | 271 | 711 | IPR036457 | - | |
Cmu04g0856 | 867 | MobiDBLite | consensus disorder prediction | 160 | 195 | - | - | |
Cmu04g0856 | 867 | Pfam | Protein phosphatase 2C | 425 | 686 | IPR001932 | - | |
Cmu04g0856 | 867 | ProSiteProfiles | PPM-type phosphatase domain profile. | 260 | 715 | IPR001932 | - | |
Cmu04g0856 | 867 | SMART | PP2C_4 | 249 | 713 | IPR001932 | - | |
Cmu04g0856 | 867 | MobiDBLite | consensus disorder prediction | 330 | 375 | - | - | |
Cmu04g0856 | 867 | CDD | PP2Cc | 434 | 710 | IPR001932 | - | |
Cmu04g0856 | 867 | MobiDBLite | consensus disorder prediction | 346 | 360 | - | - | |
Cmu04g0856 | 867 | FunFam | Protein phosphatase 2C 29 | 419 | 722 | - | - | |
Cmu04g0856 | 867 | Gene3D | - | 221 | 718 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu04g0856 | Cmu-Chr4:23096116 | Cmu10g1030 | Cmu-Chr10:2277504 | 1.90E-120 | dispersed | |
Cmu05g0668 | Cmu-Chr5:5776213 | Cmu04g0856 | Cmu-Chr4:23096116 | 5.10E-63 | transposed | |
Cmu02g2011 | Cmu-Chr2:33857304 | Cmu04g0856 | Cmu-Chr4:23096116 | 1.60E-197 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu04g0856 | - | - | - | 0.0 |