Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g0857 ATGGGTAGACTAGCTGTAGCCGCTATCGTGAGTTTATGGGTGGTTCCGATCTCCATCCTCGTCAACCGCATTCTTCCTGATCCTTATATGGACGAGATATTTCATGTGCCTCAAGCTCAGAAGTACTGCAGTGGGAACTTCAGAAGTTGGGACCCCATGATTACAACTCCTCCTGGACTGTACTATCTTTCACTTGTCCATGTTGCTTCTTTGTTTCCAGCCATTGTCTTTACTCGAGCAGCACAATCATTTTCTGTAGCCTGTTCCATTCAGGTTCTTCGTTCTATCAATGGGATTTTGGCAGTTTTGTGCAGTGTACTTGTATATGAGATAATCTCCCATTTAAGGCCAAATCTTGATGATAAAAAGGCAACGATTTATGCTGTGATTTTAGCACTTTATCCACTCCATTGGTTCTTCACTTTTCTGTATTACACTGATGTTGCATCGCTTACAGCCGTCCTTGCTATGTACCTAGCATGCTTGAAGAAGAATTACTGGTTGAGTGCATTGTTTGGTATCTTTGCAGTTGTCATTCGACAAACAAATGTTATATGGATGCTATTTGTAGCATGCTCTGGGATTATTGATACTACTCTGACTTGCCACGTTGATAATATACAAATGCATGAGAATGATGTAATGGAGGAAAGTAATCCATTGAATGCTAAAGGCAATTTCGCTTCTAGAGCAAACTTGCGAAAGAGAAAGTTGAATCGTACAAAGGATATGGTTAAACAATTTCCACAGAGCACAAGATTCTCATCAATAAACCAGAAACTAGCTTTAATGGACGAGATTAGGACCATGACATTGACCATGTGGCATATGAAATTTAAGCTCTTGGTTTCATTTTGCCCCTTTGCGATTGTGCTTATGGCATTTGTTGCTTTTGTTCGTTGGAATGGAAGTATAGTTCTTGGTGCAAAGGAAGCACATGCAGTCTCTCTGCATTTTGCCCAGATTATGTATTTTGGTCTTTTCTCTGGTTTTATTATGGCTCCAGTGCACTGTAATCTAAGTCAAGTCATAGATTTGTTTCACTCATTCTGGAAAGGCAGGCCTCTTAGTTTTTTTCAAGTTTGCGTTGCTCTTCTTGCTGGCTTCATCTCTGTACACTATTTCAGCATAGCTCACCCCTATCTGCTAGCTGACAATCGGCATTACCCATTCTACCTCTGGCGTAAAGTTATCAACGCGCATTGGTCATCGAAGTACCTTCTCGTTCCAGCATATATTTGTTCATGGCTTTCCATCATCAACATATTAGGGAAATCTCAGAGGAAAATCTGGGTACTTGCCTATTTCTTAGCCACTGCTGCGGTTCTTGTTCCTGCTCCTTTGATCGAGTTTAGATACTTCACAACTCCAATTTACTTCTTGATGCTTCATTCTCAGATGAATGGTAGACTAAGTAGGCTCTTGGTTGCACTTCTTTACATAGCTTTGAATGCCTTCACAATGTTCATGTTCTTGTTTCGTCCATTTTATTGGGAAAATGAAACTGGAAAGCAGAGGATTCTGTCGTGGAATTACAGTCTAACAGGTTTGCTAGTAGAAATCAGTTGGTTTAGATTTGTTAAGTTATCACTCCAATTATATCAAATTTCTCTGTCTTCGAGCTCAATTTGCTTCTCCGATTCTGAATTATCGACCCCTTTTGACCTTCAAATGGCGATCTCCGGCTTTCGAGCTCTTCTATGGTGGAGCAACAGATGGTCCAAGAAAGACTGGGCGATTGCAGCTATCTGTTTCGCTTTCATTGTTTTCGTTTTTTCCTTCCTCTCCGATTCTTGGCATGCTGAAGATAGTGGCATCAACCATAGTTTCGATCTCAATCCCGCCAATGACCCCGATTTGGTTGACCTATCTTTGCTTCAGAATGCCAAAGCAAAAGGCGCTCTATGTCTTGATGGGAGTCTGCCTGGATACCATTTTCAGAAAGGCTTTGGATCTGGTTCTACCAGCTGGGTTCTTCATATTGAGGGTGGAGGTTGGTGCGATACAGTCTCGTCTTGTTCTTCGCGGAAAATGACCCCGTTAGGTTCATCAGACTACATGGAGCGTCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAAATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAAGGTGAAACAAAGAATGGAGATGTACTTTATTTCAGAGGCCAGCTCATCTGGGAAGCACTTATGGATGAACTCTTATCTGTTGGCTTGTCAAAGGCTAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTACCGAAGGATGCAACTGTCAAGTGTCTGGCTGATGGTGGATTTTTCCTTGACGAGGAAGATGTTTGGGGAAATCGTACAATGAGATCTTTCTATCGTGATGTTTTCAACCTTCAGAGAACTGGTAAAAGCTTACCCAAGGATTGTACAGCTACAGACGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATACACACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAACATGTCTTGGTGCCAAACACATTAGATCCTGCTGGCTCTTGGCAAAAATGTAGGCTTAATATTCATAAATGTGACCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGGGACTCTTTGCTGAAGGCGCTGAGTGACTTCAAGCACAACAAGGAAGGAGGACTTTTTGTAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAGGACTATAGCAGAGGCCGTGGGTGATTGGTACTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTTATCCAAGCCGTTGATGTTATTAGATTCTTACGTGCTCCGAGTCAGCCATAA 3009 41.91 MGRLAVAAIVSLWVVPISILVNRILPDPYMDEIFHVPQAQKYCSGNFRSWDPMITTPPGLYYLSLVHVASLFPAIVFTRAAQSFSVACSIQVLRSINGILAVLCSVLVYEIISHLRPNLDDKKATIYAVILALYPLHWFFTFLYYTDVASLTAVLAMYLACLKKNYWLSALFGIFAVVIRQTNVIWMLFVACSGIIDTTLTCHVDNIQMHENDVMEESNPLNAKGNFASRANLRKRKLNRTKDMVKQFPQSTRFSSINQKLALMDEIRTMTLTMWHMKFKLLVSFCPFAIVLMAFVAFVRWNGSIVLGAKEAHAVSLHFAQIMYFGLFSGFIMAPVHCNLSQVIDLFHSFWKGRPLSFFQVCVALLAGFISVHYFSIAHPYLLADNRHYPFYLWRKVINAHWSSKYLLVPAYICSWLSIINILGKSQRKIWVLAYFLATAAVLVPAPLIEFRYFTTPIYFLMLHSQMNGRLSRLLVALLYIALNAFTMFMFLFRPFYWENETGKQRILSWNYSLTGLLVEISWFRFVKLSLQLYQISLSSSSICFSDSELSTPFDLQMAISGFRALLWWSNRWSKKDWAIAAICFAFIVFVFSFLSDSWHAEDSGINHSFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGSTSWVLHIEGGGWCDTVSSCSSRKMTPLGSSDYMERRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEGETKNGDVLYFRGQLIWEALMDELLSVGLSKARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADGGFFLDEEDVWGNRTMRSFYRDVFNLQRTGKSLPKDCTATDEPSKCLFPQEIIKHIHTPLFLVNPAYDFWQIQHVLVPNTLDPAGSWQKCRLNIHKCDHAQLEILQGFRDSLLKALSDFKHNKEGGLFVNSCFIHCQTWMSETWHSPNSPRINKRTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFIQAVDVIRFLRAPSQP 1002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23101855 23117943 - CmPI595203_04g008570.1 Cmu04g0857 414442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g0857 1002 PANTHER ALPHA-1,2-GLUCOSYLTRANSFERASE ALG10 1 508 IPR016900 GO:0005783(PANTHER)|GO:0006487(PANTHER)|GO:0006488(InterPro)|GO:0106073(PANTHER)|GO:0106073(InterPro)
Cmu04g0857 1002 Pfam DIE2/ALG10 family 26 462 IPR016900 GO:0006488(InterPro)|GO:0106073(InterPro)
Cmu04g0857 1002 Pfam Pectinacetylesterase 618 967 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2377 Cmu-Chr3:32479418 Cmu04g0857 Cmu-Chr4:23101855 3.30E-116 transposed
Cmu07g1102 Cmu-Chr7:26081005 Cmu04g0857 Cmu-Chr4:23101855 2.10E-96 transposed
Cmu04g0857 Cmu-Chr4:23101855 Cmu05g0919 Cmu-Chr5:8329309 8.20E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g0857 K03850 - csv:101214003 913.679