Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g0923 ATGGTCAAGTCATGTGATGCATCTCTTTTATTAGAGATGAAAAAGGAAGAAGGTGTATCAGAAATGAAGTCTTCAAGAAGCTTTGGGATAAGAAATCTCAAATATGTTAATAAAATTAAACAAGTCCTTGAAAATGAATGCCCTAACACTGTTTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCTATTGTTTTGTTGGGGGGATTAGAGATGGAAATGAAAACAGGAAGAAGAGATAGCAAAGAAAGCTATGGAGAAATAGTGGAAGAAATGATTCCAAATCATAATGACTCTCTTTCATTGGTTCTTTCTCGATTTCAAGATATTGGCATTGATCCTCAAGCTACTGTTGCTCTTTTAGGAGCCCACTCGGTGGGTCGAGTCCATTGTGTAAACATAGTGAACCGTCTCTACCCGACCGTGGACCCGACTTTGGATCCAGATCACGCAGAATATTTAAAAGAAAGGTGCCCAAACCCGAACCCGGATCCGAAGGCAGTCCAATACGCGAGAAATGATTTGGAAACTCCGATGGTGTTGGACAACAATTTCTACAAAAACGTATTGGGGCACAAGGCCCTTTTGTTAGTGGACCAGCAATTGGGCTCAAGCCCAATAACTCTTCCTTATGTCCAACAAATGACCTCCAATAACACTTACTTTCTGGCCCAATTTGCTAGGGCTTTGCTCTTGCTGTCTGAGAACAACCCTCTCACTGGTGAAGAAGGAGAGATTAGAAAGGATTGTCGACGTGTCAACAATTGA 771 41.5 MVKSCDASLLLEMKKEEGVSEMKSSRSFGIRNLKYVNKIKQVLENECPNTVSCADIMALAARDAIVLLGGLEMEMKTGRRDSKESYGEIVEEMIPNHNDSLSLVLSRFQDIGIDPQATVALLGAHSVGRVHCVNIVNRLYPTVDPTLDPDHAEYLKERCPNPNPDPKAVQYARNDLETPMVLDNNFYKNVLGHKALLLVDQQLGSSPITLPYVQQMTSNNTYFLAQFARALLLLSENNPLTGEEGEIRKDCRRVNN 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23697010 23698654 - CmPI595203_04g009230.1 Cmu04g0923 414508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g0923 256 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Plant peroxidase signature 31 44 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Plant peroxidase signature 69 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Plant peroxidase signature 50 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Plant peroxidase signature 116 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Plant peroxidase signature 189 206 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Plant peroxidase signature 229 242 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 FunFam Peroxidase 95 234 - -
Cmu04g0923 256 Pfam Peroxidase 2 219 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 ProSiteProfiles Plant heme peroxidase family profile. 1 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PANTHER - 1 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 Gene3D - 1 255 - -
Cmu04g0923 256 SUPERFAMILY Heme-dependent peroxidases 2 255 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 Gene3D Peroxidase, domain 2 95 234 - -
Cmu04g0923 256 PRINTS Haem peroxidase superfamily signature 117 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Haem peroxidase superfamily signature 69 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 PRINTS Haem peroxidase superfamily signature 51 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu04g0923 256 CDD secretory_peroxidase 2 254 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1073 Cmu-Chr3:5231966 Cmu04g0923 Cmu-Chr4:23697010 2.30E-82 dispersed
Cmu04g0923 Cmu-Chr4:23697010 Cmu07g0876 Cmu-Chr7:22090367 1.50E-41 dispersed
Cmu10g2762 Cmu-Chr10:34235242 Cmu04g0923 Cmu-Chr4:23697010 1.60E-99 wgd
Cmu04g0923 Cmu-Chr4:23697010 Cmu05g0869 Cmu-Chr5:7926605 8.70E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g0923 K00430 - csv:101221151 461.455