Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu04g0993 | ATGGCTTCTACTCTCTGTTTTCCCTCAATCACTTTCCCCTCCTCTCCCTTCCACAAACGAATCCCTCTCAGACGAAGAACCCCATCTCCTTATCCCTCCATTAAATCCTCCATTGACGAAGGAGGAAATCCCTCAACGCCCGCAAAGCTTAAGAACTCCACAAGCACTGCAAAATCCGGCTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTAACTCGTTACATTACTCTAGGGCAGGGCGACGACTCCGGCATCCCCATTGCAACTGCCAAGCTCGATGACGTTTCTGATCTTCTCGGCGGTGCTCTTTTCCTTCCACTTTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTCGCTGCTGGCCCTAGAAATTTTGTCGTCGTTAGTGATCCTGCCATTGCTAAGCACGTTCTCAGGAACTATGGGACTTACGCTAAAGGCCTTGTTTCTGAGGTTTCCGAGTTCTTGTTTGGGTCAGGTTTCGCCATTGCAGAAGGCCCTCTCTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCGGTTATTGTCGATCGAGTATTTTGTAAATGTGCCACGAGATTGGTGGAGAAGCTGGAAAAGGATGCATTAAATAATAATTCGGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCAGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCATATTGGAAGATTAAGGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACGGTGATCAGGAGAACTGTTGAAGAACTCATTGCCAAGTGCAAAGAAATTGTTGAAAGTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGATGCTGATCCAAGCATCCTCCGATTTCTGCTGGCCAGTAGAGAAGAGGTCTCAAGTGTACAGTTACGAGACGACCTATTGTCCATGTTGGTTGCTGGGCATGAAACTACTGGTTCTGTTCTGACTTGGACACTGTATCTTTTAAGTAAGCATTCCTCATCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTGTTACAAGGAAGGCCTCCTTCTTATGAAGATACGAAGGAACTTAAATATTTGACACGTTGTATCCTTGAGTCAATGCGACTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTTGCCGACATACTCCCCGGAAATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTCTGGGAACAATCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGCCCTGTGCCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGCGGTGGACCTCGAAAATGTGTCGGTGATCAATTTGCCTTGCTTGAAGCTATTGTTGCACTTGCCATATTTCTACAGCATATGAATTTCGAGCTGGTTCCAAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAACGGTTTGTACATGAAACTCAGCCAAAGGAAGCTGACCCAAGAGTTAGTTTCTCCTGCATCTTCAAGATGGCGGTGGCCGGAGATGGAAGCCGGGTGGTTGCTGATGGCTTTCCTTGGTGATGCCTCCTGCATAATTTGCCTCAGTGGCTCGTGTTTCGCCAACGTTGTTATGACCAATGTCATGGCGTCTGCGTCTGGGACGGGGAATATTGATGATTGTTTTGTGGTGCCTGGGTTGGAGCATAGGGTAGAGGTCACCAAGGCTCAATTGCCCATTCATGGGGTTTTGAGTGGTGGGATGATGAAGTTTTTGGAGCAAATTGGTGAGGCTGAGAAGAAATGTTATGCGATGATTGTTAATAGCTTTGAGGAGTTGGAGGGTTCTTATGTAACACAATTGAAGAAGAAGGTTAGAGGAAATAGAGTTTGGTGTGTTGGACCTGTTTCTTCTTGTAATAAACATTATGTGGACAAAGCTCAAAGAGGCAAAGGCTCAACAGAGGAGGGGCAGGACAACAATAACAACAATGATAAAGTGATGAAGTGGCTGGACTTGCAAGACCCAAACTCAGTGGTGCCATTTATATGGGTGGTAAGAGCCTCAAACAAGCTAGAACAATGGATTGAAGAAGAGAATTTTGATGAGAGAATCAAAACAAGAGGTCTTGTTATAAGAGATTGGGCTCCACAACTTTTGATATTATCACACTCAGCCATTGGGGGATTCCTCACTCATTGTGGTTGGAACTCAGTCCTTGAAGCCATATCTGCTGGCTTGCCAATGCTCACTTGGCCTTTATTCTCAGACCAGTTTTTGAATGAGAAATTGGTGGCTGATGTTTTGATTATAGCTGTGAAAATTGGTGCTAAAAATCCAGGGATGAAAAGGAAGGAAGAAGGAGAAGATGAAGAAGAAGAGGAGGGAATAATAACAGAGGTAAAGAATGAAAATGTTAGGGAAGGAATTGAAAGGTTAATGGGAAAAGGAGATGAAGCTGAGGAAAGAAGGGGTTATGGCAAAGAATGCTTGTGA | 2640 | 43.98 | MASTLCFPSITFPSSPFHKRIPLRRRTPSPYPSIKSSIDEGGNPSTPAKLKNSTSTAKSGSWVSPDWLTSLTRYITLGQGDDSGIPIATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCATRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVESEGERIDEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADILPGNYKVNAGQDIMISVYNIHRSSQVWEQSEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTQELVSPASSRWRWPEMEAGWLLMAFLGDASCIICLSGSCFANVVMTNVMASASGTGNIDDCFVVPGLEHRVEVTKAQLPIHGVLSGGMMKFLEQIGEAEKKCYAMIVNSFEELEGSYVTQLKKKVRGNRVWCVGPVSSCNKHYVDKAQRGKGSTEEGQDNNNNNDKVMKWLDLQDPNSVVPFIWVVRASNKLEQWIEEENFDERIKTRGLVIRDWAPQLLILSHSAIGGFLTHCGWNSVLEAISAGLPMLTWPLFSDQFLNEKLVADVLIIAVKIGAKNPGMKRKEEGEDEEEEEGIITEVKNENVREGIERLMGKGDEAEERRGYGKECL | 879 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 24472085 | 24483300 | - | CmPI595203_04g009930.1 | Cmu04g0993 | 414578 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu04g0993 | 879 | Gene3D | Glycogen Phosphorylase B; | 600 | 704 | - | - | |
| Cmu04g0993 | 879 | Gene3D | Cytochrome P450 | 90 | 560 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | Coils | Coil | 851 | 871 | - | - | |
| Cmu04g0993 | 879 | MobiDBLite | consensus disorder prediction | 30 | 58 | - | - | |
| Cmu04g0993 | 879 | Pfam | Cytochrome P450 | 107 | 528 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | CDD | CYP97 | 105 | 539 | - | - | |
| Cmu04g0993 | 879 | ProSitePatterns | UDP-glycosyltransferases signature. | 763 | 806 | IPR035595 | - | |
| Cmu04g0993 | 879 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 486 | 495 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu04g0993 | 879 | Gene3D | Glycogen Phosphorylase B; | 705 | 726 | - | - | |
| Cmu04g0993 | 879 | PANTHER | CYTOCHROME P450 FAMILY 4 | 102 | 543 | IPR050196 | GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER) | |
| Cmu04g0993 | 879 | CDD | GT1_Gtf-like | 677 | 815 | IPR002213 | GO:0008194(InterPro) | |
| Cmu04g0993 | 879 | MobiDBLite | consensus disorder prediction | 693 | 712 | - | - | |
| Cmu04g0993 | 879 | PRINTS | P450 superfamily signature | 484 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | P450 superfamily signature | 353 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | P450 superfamily signature | 405 | 416 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | P450 superfamily signature | 493 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | MobiDBLite | consensus disorder prediction | 23 | 58 | - | - | |
| Cmu04g0993 | 879 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 569 | 867 | - | - | |
| Cmu04g0993 | 879 | SUPERFAMILY | Cytochrome P450 | 100 | 545 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | Pfam | UDP-glucoronosyl and UDP-glucosyl transferase | 759 | 814 | IPR002213 | GO:0008194(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | E-class P450 group I signature | 483 | 493 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | E-class P450 group I signature | 445 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | E-class P450 group I signature | 493 | 516 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | E-class P450 group I signature | 362 | 388 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | E-class P450 group I signature | 342 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | PRINTS | E-class P450 group I signature | 111 | 130 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu04g0993 | 879 | Gene3D | Glycogen Phosphorylase B; | 727 | 872 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu04g0993 | Cmu-Chr4:24472085 | Cmu10g1608 | Cmu-Chr10:14000940 | 2.60E-128 | dispersed | |
| Cmu04g0992 | Cmu-Chr4:24466085 | Cmu04g0993 | Cmu-Chr4:24472085 | 1.90E-59 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu04g0993 | K09837 | - | csv:101204961 | 1037.71 |