Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g0993 ATGGCTTCTACTCTCTGTTTTCCCTCAATCACTTTCCCCTCCTCTCCCTTCCACAAACGAATCCCTCTCAGACGAAGAACCCCATCTCCTTATCCCTCCATTAAATCCTCCATTGACGAAGGAGGAAATCCCTCAACGCCCGCAAAGCTTAAGAACTCCACAAGCACTGCAAAATCCGGCTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTAACTCGTTACATTACTCTAGGGCAGGGCGACGACTCCGGCATCCCCATTGCAACTGCCAAGCTCGATGACGTTTCTGATCTTCTCGGCGGTGCTCTTTTCCTTCCACTTTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTCGCTGCTGGCCCTAGAAATTTTGTCGTCGTTAGTGATCCTGCCATTGCTAAGCACGTTCTCAGGAACTATGGGACTTACGCTAAAGGCCTTGTTTCTGAGGTTTCCGAGTTCTTGTTTGGGTCAGGTTTCGCCATTGCAGAAGGCCCTCTCTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCGGTTATTGTCGATCGAGTATTTTGTAAATGTGCCACGAGATTGGTGGAGAAGCTGGAAAAGGATGCATTAAATAATAATTCGGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCAGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCATATTGGAAGATTAAGGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACGGTGATCAGGAGAACTGTTGAAGAACTCATTGCCAAGTGCAAAGAAATTGTTGAAAGTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGATGCTGATCCAAGCATCCTCCGATTTCTGCTGGCCAGTAGAGAAGAGGTCTCAAGTGTACAGTTACGAGACGACCTATTGTCCATGTTGGTTGCTGGGCATGAAACTACTGGTTCTGTTCTGACTTGGACACTGTATCTTTTAAGTAAGCATTCCTCATCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTGTTACAAGGAAGGCCTCCTTCTTATGAAGATACGAAGGAACTTAAATATTTGACACGTTGTATCCTTGAGTCAATGCGACTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTTGCCGACATACTCCCCGGAAATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTCTGGGAACAATCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGCCCTGTGCCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGCGGTGGACCTCGAAAATGTGTCGGTGATCAATTTGCCTTGCTTGAAGCTATTGTTGCACTTGCCATATTTCTACAGCATATGAATTTCGAGCTGGTTCCAAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAACGGTTTGTACATGAAACTCAGCCAAAGGAAGCTGACCCAAGAGTTAGTTTCTCCTGCATCTTCAAGATGGCGGTGGCCGGAGATGGAAGCCGGGTGGTTGCTGATGGCTTTCCTTGGTGATGCCTCCTGCATAATTTGCCTCAGTGGCTCGTGTTTCGCCAACGTTGTTATGACCAATGTCATGGCGTCTGCGTCTGGGACGGGGAATATTGATGATTGTTTTGTGGTGCCTGGGTTGGAGCATAGGGTAGAGGTCACCAAGGCTCAATTGCCCATTCATGGGGTTTTGAGTGGTGGGATGATGAAGTTTTTGGAGCAAATTGGTGAGGCTGAGAAGAAATGTTATGCGATGATTGTTAATAGCTTTGAGGAGTTGGAGGGTTCTTATGTAACACAATTGAAGAAGAAGGTTAGAGGAAATAGAGTTTGGTGTGTTGGACCTGTTTCTTCTTGTAATAAACATTATGTGGACAAAGCTCAAAGAGGCAAAGGCTCAACAGAGGAGGGGCAGGACAACAATAACAACAATGATAAAGTGATGAAGTGGCTGGACTTGCAAGACCCAAACTCAGTGGTGCCATTTATATGGGTGGTAAGAGCCTCAAACAAGCTAGAACAATGGATTGAAGAAGAGAATTTTGATGAGAGAATCAAAACAAGAGGTCTTGTTATAAGAGATTGGGCTCCACAACTTTTGATATTATCACACTCAGCCATTGGGGGATTCCTCACTCATTGTGGTTGGAACTCAGTCCTTGAAGCCATATCTGCTGGCTTGCCAATGCTCACTTGGCCTTTATTCTCAGACCAGTTTTTGAATGAGAAATTGGTGGCTGATGTTTTGATTATAGCTGTGAAAATTGGTGCTAAAAATCCAGGGATGAAAAGGAAGGAAGAAGGAGAAGATGAAGAAGAAGAGGAGGGAATAATAACAGAGGTAAAGAATGAAAATGTTAGGGAAGGAATTGAAAGGTTAATGGGAAAAGGAGATGAAGCTGAGGAAAGAAGGGGTTATGGCAAAGAATGCTTGTGA 2640 43.98 MASTLCFPSITFPSSPFHKRIPLRRRTPSPYPSIKSSIDEGGNPSTPAKLKNSTSTAKSGSWVSPDWLTSLTRYITLGQGDDSGIPIATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCATRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVESEGERIDEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADILPGNYKVNAGQDIMISVYNIHRSSQVWEQSEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTQELVSPASSRWRWPEMEAGWLLMAFLGDASCIICLSGSCFANVVMTNVMASASGTGNIDDCFVVPGLEHRVEVTKAQLPIHGVLSGGMMKFLEQIGEAEKKCYAMIVNSFEELEGSYVTQLKKKVRGNRVWCVGPVSSCNKHYVDKAQRGKGSTEEGQDNNNNNDKVMKWLDLQDPNSVVPFIWVVRASNKLEQWIEEENFDERIKTRGLVIRDWAPQLLILSHSAIGGFLTHCGWNSVLEAISAGLPMLTWPLFSDQFLNEKLVADVLIIAVKIGAKNPGMKRKEEGEDEEEEEGIITEVKNENVREGIERLMGKGDEAEERRGYGKECL 879
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 24472085 24483300 - CmPI595203_04g009930.1 Cmu04g0993 414578
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g0993 879 Gene3D Glycogen Phosphorylase B; 600 704 - -
Cmu04g0993 879 Gene3D Cytochrome P450 90 560 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 Coils Coil 851 871 - -
Cmu04g0993 879 MobiDBLite consensus disorder prediction 30 58 - -
Cmu04g0993 879 Pfam Cytochrome P450 107 528 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 CDD CYP97 105 539 - -
Cmu04g0993 879 ProSitePatterns UDP-glycosyltransferases signature. 763 806 IPR035595 -
Cmu04g0993 879 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 486 495 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu04g0993 879 Gene3D Glycogen Phosphorylase B; 705 726 - -
Cmu04g0993 879 PANTHER CYTOCHROME P450 FAMILY 4 102 543 IPR050196 GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER)
Cmu04g0993 879 CDD GT1_Gtf-like 677 815 IPR002213 GO:0008194(InterPro)
Cmu04g0993 879 MobiDBLite consensus disorder prediction 693 712 - -
Cmu04g0993 879 PRINTS P450 superfamily signature 484 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS P450 superfamily signature 493 504 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 MobiDBLite consensus disorder prediction 23 58 - -
Cmu04g0993 879 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 569 867 - -
Cmu04g0993 879 SUPERFAMILY Cytochrome P450 100 545 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 759 814 IPR002213 GO:0008194(InterPro)
Cmu04g0993 879 PRINTS E-class P450 group I signature 483 493 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS E-class P450 group I signature 493 516 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 PRINTS E-class P450 group I signature 111 130 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu04g0993 879 Gene3D Glycogen Phosphorylase B; 727 872 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0993 Cmu-Chr4:24472085 Cmu10g1608 Cmu-Chr10:14000940 2.60E-128 dispersed
Cmu04g0992 Cmu-Chr4:24466085 Cmu04g0993 Cmu-Chr4:24472085 1.90E-59 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g0993 K09837 - csv:101204961 1037.71