Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1003 ATGAAGTTGCCGGTTTTTATAATTCCTCTCATCGCTCTTTCTTGTTTTATTGCTGTTTTGGGTCCTCAGTTCTCCACAGATTGGACCATTTTCTTTGATAAATATGCTTCAATCCAGACCTCTGTTTCTTCTTCCTCCCAAACAGAGGATTTCCATTCTAATACCTCCGCCGCCGCCGCCGCGAAGGATCAAACAGTAGAACACCTTCACCAACCTCTGTTCAATCACTCTCTTTTCTCGAATCACTCTGTTTTCTCAAACCACTCTGTTTTTTCTTCTTCTTCTTCTCCTCCATCGCCACCACCGAACGACGAAATGCAGAGTCTTCACCTACACTCTAATAGGACGAGAGTCAACGAAGATTTGGGAGAAACCGCCATTAATGAAGTGATCGGAAACGTTTCTTCTGAAAGTAATTATGAATCGGCGGTGACAGTGAAAGCGAGAAGACAAAGGGAATATACAAAATTAGAGAGAATCGAAGCAGGGCTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCCAAGTTCCATAACCAAACTCAAGATCCTGACTTTGTTCCTTCTGGCCCAATGTATTGGAATTCCAAAGCGTTTCACAGGAGTTACCTAGAAATGGAGAAGGATATGAAGATCTTCGTGTACGAAGAAGGAGAGCCTCCTCTGTTTCACAATGGCCCTTGCAAGAGCATTTACTCAACCGAAGGCAACTTCATCCACGCCATCGAAATGGACTCCCGGTTTCGAACCAAAGATCCCGAAAAGGCCCATGTCTTCTTCCTTCCTCTCAGCGTTGCAATGCTCGTTCGGTTCGTCTATGTTCATGACTCACACGACTTCACTCCAATACGACACACCGTTGTTGATTACATCAATGTCATTGGAACCAAATATCCGTTCTGGAATCGCACACTTGGTGCTGATCATTTCATGCTCTCCTGTCATGATTGGGGCCCAGAAGCATCGAAGTCAGTTCCCCATTTATACAAAAACTCGATCCGAGTACTTTGCAACGCCAACACTTCCGAAGGCTTCAACCCATCAAAGGATGTATCATTCCCAGAAATCAATCTACAGACAGGTTTCTTGACCGGATTTCTTGGCGGTCCATCTCCCTCGCGCCGCCCAATTCTGGCCTTCTTCGCCGGTGGGCTTCACGGCCCAATAAGGCCCATTCTAATCCAGCAATGGGAGAACCAAGACCAAGACATTCAAGTCCACCAGTACCTCCCCAAAGGGGTCTCTTACATTGACATGATGAGGAAGAGCAAGTTCTGCCTCTGCCCCAGCGGCTACGAAGTCGCCAGTCCAAGAATTGTCGAGGCCATTTACACCGGCTGCATTCCTGTCCTAATTTCCGACCACTACGTCCCACCATTCAGCGATGTCATCAATTGGAAATCTTTCTCCGTGGAAGTCTCGATCGATGACATTCCAAACTTGAAGACAATCCTGACCGGGATATCGACGCGGCAGTACTTGAGAATGTATAGGAGAGTGGTGAAAGTTAGGAGACACTTTGAAGTGAACTCTCCGGCGAAGAGATTTGATGTGTATCATATGATACTTCATTCTGTGTGGCTTAGAAGACTCAATCTTAGACTGCGTGATCGTTGA 1614 46.34 MKLPVFIIPLIALSCFIAVLGPQFSTDWTIFFDKYASIQTSVSSSSQTEDFHSNTSAAAAAKDQTVEHLHQPLFNHSLFSNHSVFSNHSVFSSSSSPPSPPPNDEMQSLHLHSNRTRVNEDLGETAINEVIGNVSSESNYESAVTVKARRQREYTKLERIEAGLRRARAAIREAKFHNQTQDPDFVPSGPMYWNSKAFHRSYLEMEKDMKIFVYEEGEPPLFHNGPCKSIYSTEGNFIHAIEMDSRFRTKDPEKAHVFFLPLSVAMLVRFVYVHDSHDFTPIRHTVVDYINVIGTKYPFWNRTLGADHFMLSCHDWGPEASKSVPHLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGFLTGFLGGPSPSRRPILAFFAGGLHGPIRPILIQQWENQDQDIQVHQYLPKGVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCIPVLISDHYVPPFSDVINWKSFSVEVSIDDIPNLKTILTGISTRQYLRMYRRVVKVRRHFEVNSPAKRFDVYHMILHSVWLRRLNLRLRDR 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24569885 24572865 + CmPI595203_04g010030.1 Cmu04g1003 414588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1003 537 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 232 463 - -
Cmu04g1003 537 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Cmu04g1003 537 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 112 529 IPR004263 GO:0006486(InterPro)|GO:0016757(InterPro)
Cmu04g1003 537 Pfam Exostosin family 206 485 IPR040911 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1003 Cmu-Chr4:24569885 Cmu08g0148 Cmu-Chr8:2917370 1.10E-150 dispersed
Cmu04g1003 Cmu-Chr4:24569885 Cmu11g0318 Cmu-Chr11:3749438 5.40E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1003 - - - 0.0