Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1004 ATGGCCACTTCCGGGTTTCTTCTTTACCTTCTTCCTGCCTCTTCCATCGCCGTTCTCTCTGTTCTCTACCTCTCTAACTCTCCTTCTTCTTCCTCCTCCTCCCCCGCCCTCTCCGCCTCTCTCTCCACCGACAAAACATGGCCGGATTTGGAGCTGAGTTGGAGACTTGTGGCGGCGACGGTGATCGGATTTCTCGGCTCTGCTTGCGGGACCGTTGGAGGAGTCGGCGGCGGCGGCATTTTTGTCCCTATGCTTACTTTGATTATTGGGTTCGACACCAAATCTGCTGCTGCCATTTCCAAATGTATGATAATGGGGGCTTCTACATCATCGGTTTGGTACAATTTAAGAGTGGCTCATCCGACCAAGGATGTGCCGATTATAGATCATGATTTAGCTTTGTTGTTTCAGCCTATGTTGATGCTTGGAATCACCGTTGGTGTTGCCCTTAGCGTTGTTTTTCCCTACTGGCTTATCACTGTGCTCATCATTATTCTCTTTATTGGGACTTCCTCCAGGTCTTTCTTCAAGGGCATTGAGATGTGGAAAGAAGAAACTATTCTCAAGAAAGAATTTGCCAAACAATGTGAAGCTGTTGTGAATTCTCATGGCGAACTATTGATTGATGTAGAGTATGACCCACTGATTCCCAAAGAACAGAAAACAGCACTGGAATTAATGTGCTTCAATCTTAGGTGGAAAAGGACCTCCATTTTGGTAGTTGTTTGGATTTCTTTCCTCATACTTCAAGTTGTGAAGAATGATGTAGCAGTTTGTAGCAATTGGTATTGGCTCATCTTCTCCTTACAGTTCCCCATAGCAATTGGACTGTTTGGTTATGAAGCAAGAAAGCTATACAAAGAACACAAGAAGAGGATGGAGACAGGGAACTTAGAACACATTTGTGAGGCTTCAATTGGATGGACTGGCACACACCTTGCCTTTTGTGCACTCTGTGGCATTGTTGGAGGCACTGTTGGAGGCCTTTTGGGTTCTGGTGGTGGCTTTGTTTTAGGCCCTTTGCTCTTGGAAATTGGTGTTGTCCCTCAAGTTGCTAGTGCCACAGCAACTTTTGTTATGATGTTCTCCTCTTCCTTATCTGTTGTTGAGTTCTACTTGCTCAACAGGTTTCCCATTCCATATGCTCTGTACCTTACATCGGTGTCGGTTCTCGCCGGGTTCTGGGGGCAGTTCTTTGTTAGAAAAATGATCACCATTCTAAGGAGAGCCTCACTCATTGTGTTTATCCTATCTGGTGTCATCTTTGCTAGTGCCATCACCATGGGCATTGTAGGAACAACGAAAAGTATAACAATGATACAGAATCATGAGTTCATGGGGTTCTTAGATTTCTGCAGCAGTGGGTGA 1368 45.32 MATSGFLLYLLPASSIAVLSVLYLSNSPSSSSSSPALSASLSTDKTWPDLELSWRLVAATVIGFLGSACGTVGGVGGGGIFVPMLTLIIGFDTKSAAAISKCMIMGASTSSVWYNLRVAHPTKDVPIIDHDLALLFQPMLMLGITVGVALSVVFPYWLITVLIIILFIGTSSRSFFKGIEMWKEETILKKEFAKQCEAVVNSHGELLIDVEYDPLIPKEQKTALELMCFNLRWKRTSILVVVWISFLILQVVKNDVAVCSNWYWLIFSLQFPIAIGLFGYEARKLYKEHKKRMETGNLEHICEASIGWTGTHLAFCALCGIVGGTVGGLLGSGGGFVLGPLLLEIGVVPQVASATATFVMMFSSSLSVVEFYLLNRFPIPYALYLTSVSVLAGFWGQFFVRKMITILRRASLIVFILSGVIFASAITMGIVGTTKSITMIQNHEFMGFLDFCSSG 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24584357 24587986 + CmPI595203_04g010040.1 Cmu04g1004 414589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1004 455 PANTHER CEREBLON 39 452 - GO:0016567(PANTHER)|GO:0031464(PANTHER)
Cmu04g1004 455 Pfam Sulfite exporter TauE/SafE 310 420 IPR002781 GO:0016020(InterPro)
Cmu04g1004 455 Pfam Sulfite exporter TauE/SafE 61 179 IPR002781 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1004 Cmu-Chr4:24584357 Cmu11g1409 Cmu-Chr11:26299649 1.20E-102 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1004 - - - 0.0