Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1005 ATGGACACTAAGAACCAAGAAGAACATCACACCGACACCAGCGATTACACGTCGGAGGACGAGGGAAGTGAAGATTACCGCCGTGGAGGCTACCACGCTGTTCGAATTGGCGACACTTTCAAGAATGGTAGATATGTGGTGCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACCGTCTGGCTCGCCTGGGACACCCAATCCCCCCGATATGTAGCTCTCAAAGTACAGAAGAGTGCTCAGCACTACACTGAGGCAGCCATGGATGAGATTACAATCTTGAAACAGATTGCAGAGGGAGACCCTGATGATAAAAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGACCTAATGGGCAACATGTTTGTATGATTTTTGAGTATTTGGGGGATAATCTGTTGACACTAATCAAGTACACTGACTACCGTGGATTACCAATTCATATGGTTAAGGAGATATGTTTTCATATATTGGTTGGCTTGGATTACTTGCATAAACAGCTTTCTATTATACATACTGATTTGAAGCCTGAAAATATTTTGTTACTCTCAATGATTGACCCATCAAAGGATCCTAGAAAATCTGGTATCCCTCTCATTCTTCCAACTAACAAGGACAAGGCTACATTTGAGTCTGGGATTTCAAAAGACATAAAATCTTCAAATGGAGATTTTGCTAAACACCATAAGAGAAACATTCGAAGAAAAGCAAAGCAAGCTGCTCAGGGGTGTGTGGAGAAGGAAATGACTGCGGAGGCTGAGGCTAATCCAGAAACATCTTATACTGTTGAATCATCTCCAAATGCAAAGTCGAGCACAGGGGCAACTGAGGAAAGGCAATCTAGTTTTCTCAATACAAACAGATCGTCTGATGCTGATGGAGGAAAGGGCAGCGGGGAAGAAAATCAAGTTGCCAAGAAAGGGAGTCGATTGAGAAAGAAGATGTTATTGGCTTCGGTGGATCTGAATTGCAAGTTGGTTGACTTTGGAAATGCATGTTGGACATACAAACAATTTACAAATGACATTCAGACTAGACAGTATAGGTGCCCAGAAGTTATCCTCGGATCAAAATACTCTACATCAGCAGATCTTTGGTCCTTTGCATGTATTTGTTTTGAGCTTGCAACTGGTGATGTGCTCTTTGATCCGCACAGTGGTGACAACTTCGACAGAGATGAGGACCACTTAGCTTTGATGATGGAACTTCTTGGAATGATGCCACGCAAGATTGCTTTCGGTGGTTGCTATTCTCGAGATTTCTTCAATCGATATGGAAATTTGAGGCACATCCGAAGGTTACGTTTCTGGCCACTAAACAAAGTTCTCATGGAGAAGTATGATTTCAACGAACAAGATGCAAATCAAATGGCAGAATTTCTAGTACCAATTCTTGATTTTGTTCCTGAGAACCGACCCTCTGCAGGCCAATGCCTTCTCCATCCATGGATGAATGCTGGGCCTCGACTGTTGGAACCATCCCTGAATCTCGCGACTTCTGAGGAGAAGAAGAAGGAGAAGGAAGATATGGAAGAAATGGAGGTTGGAATGAGAAAAATTGCCATTAGTTCAGATTCTGAACAAGCTAATGATTCCCAGGAGTCCAAGTCCAAAACCAGCAAAACCAATTCCTGA 1641 43.02 MDTKNQEEHHTDTSDYTSEDEGSEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQSPRYVALKVQKSAQHYTEAAMDEITILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMIFEYLGDNLLTLIKYTDYRGLPIHMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGIPLILPTNKDKATFESGISKDIKSSNGDFAKHHKRNIRRKAKQAAQGCVEKEMTAEAEANPETSYTVESSPNAKSSTGATEERQSSFLNTNRSSDADGGKGSGEENQVAKKGSRLRKKMLLASVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIAFGGCYSRDFFNRYGNLRHIRRLRFWPLNKVLMEKYDFNEQDANQMAEFLVPILDFVPENRPSAGQCLLHPWMNAGPRLLEPSLNLATSEEKKKEKEDMEEMEVGMRKIAISSDSEQANDSQESKSKTSKTNS 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24589103 24591625 - CmPI595203_04g010050.1 Cmu04g1005 414590
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2160 Cmu-Chr2:35230041 Cmu04g1005 Cmu-Chr4:24589103 4.60E-213 dispersed
Cmu04g1005 Cmu-Chr4:24589103 Cmu08g1177 Cmu-Chr8:24221107 2.50E-33 dispersed
Cmu04g1005 Cmu-Chr4:24589103 Cmu10g2805 Cmu-Chr10:34608970 1.20E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75472 PF00069 Pkinase 1.00E-18 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1005 K08832 - csv:101206384 1043.11