Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1007 ATGGAGTGGAATAATGGCAAAACTTTCACTCCTAACTTTGTTTCTCCACCACCACATTCTTCTTCCTCTGCTTTGCTCTACAACTGCAACAACTACAACTGCAATTTCGATCACTTTCCTGTTCAATCAGTGATGGAGACGACGACGACAAAGAAAGTGGCGGTGGAAGGTGAACAAAGTATGGTTGGAGGAGTGGATCAAAAGAAGAAGAGATTGAGTCAGGATCAGTTGGAGGCATTAGAGAGAAGCTTTCAAGAGGAAGTGAAGCTTGATCCTGATAGAAAAATGAAGCTATCAAAGGAACTTGGGCTCCAACCAAGACAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGCTGGAAAACTAAGCAGCTTGAGCATCTCTATGATACTCTCAAACAACAATTTGATAATATCTCTAAGGAAAAACATAACCTTCAACAAGAGGTGATAAAACTAAGAAGCATGCTAAGAGAACAAGCAACGAGGAATCAAGGGTCGATAGGTTGCACGGATGTCTCCGGGGAAGAGACGACGGTGGAATGCACATCGGTTGAGATTCTGAGCTGTAACAATTACATCTACAATAATGTGGAAGATTTCAACCAAATATCAGCTTCAGCTCCTCCATTCTGGTGGGGTGCTGAGGCTACTCACCTGCCTTCTTATCCTTAG 675 42.67 MEWNNGKTFTPNFVSPPPHSSSSALLYNCNNYNCNFDHFPVQSVMETTTTKKVAVEGEQSMVGGVDQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDNISKEKHNLQQEVIKLRSMLREQATRNQGSIGCTDVSGEETTVECTSVEILSCNNYIYNNVEDFNQISASAPPFWWGAEATHLPSYP 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24607553 24609926 - CmPI595203_04g010070.1 Cmu04g1007 414592
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1007 Cmu-Chr4:24607553 Cmu10g1652 Cmu-Chr10:18194454 5.90E-21 dispersed
Cmu07g0979 Cmu-Chr7:24446647 Cmu04g1007 Cmu-Chr4:24607553 1.10E-18 transposed
Cmu10g2673 Cmu-Chr10:33529430 Cmu04g1007 Cmu-Chr4:24607553 1.30E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6021 PF00046 Homeodomain 1.70E-17 CL0123 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1007 - - - 0.0