Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu04g1008 | ATGCATTCCAATCACTTGCTTCTCGAGGAGCCCATTCGAATGGCTTCCATTTTGGAGCCTTCCAAGGCTAGCTTCTTTCCTACGATGACAAAAATTGTTGGTACTCTGGGTCCTAAGTCTCGATCTGTTGAACTTATTTCTGCGTGTTTGAGGGCTGGAATGTCGGTTGCTCGGTTCGACTTTTCATGGGGTGATCCGGATTACCATCAAGAGACTTTGGAAAATTTGAAGATGGCTGTTAAAAGCACCAAGAAACTTTGCGCTGTTATGCTGGATACGGCGGGTCCTGAGGTGCTGGTTGTAAATAGAAGTGAGAAATCTATCCCTCTTCAAGAAGATGGGTTTGTTGTTTTGACACCCAATCAAGAACTAGAGCCGTCTTCGGAGCTGCTGCCTATAAATTATGATGGACTTTCAAAGGTCGTTAAGAAAGGAGACACCCTTTTTCTTGGTCAGTACCTCTTCACTGGAAGTGAGACAACTTCTGTCTGGTTGGAGGTTTCCGAAGTGAAAGGAGATGATGTTGTTTGTGTGGTAAAGAACTCTGCCACGTTGGTTGGTTCGATGTACACTTTGCATGCTGCTGAAATTCACATTGATCTTCCAACACTTACTGAAAAAGATAAAGAGATTATAGCTACATGGGGAGTGAAAAACAAGATTGACTTCCTCTCTCTGTCACATGCTAGACATGCGGAGGATGTTCGACAAGCTCGACAATTTCTTTCTAAGCTAGGCGACCTCAGCCAAACTCAAATATTTGCAAAGATTGAAAGTGTAGAGGGATTAACCCATTTTGACGATATACTAAAAGAAGCAGATGGTATTATTCTTGCTCGTGGCAATTTGGGGTTAGATCTCCCTCCTGAGAAGATCACTGGCGGCGATAGACGGAAACCAGCGGACAACAGCGGCAGGTGGTTCACACAAGGTCCACCAACAATGCCCACTCACGAACAATCAACAAGGACCGAAAAACAGCAACCTATGACCAAAAAACAACACAATTGCGAGATTCCTGCGAAAGGCAAGCGTCCGACGAATGTAAACGACCGGTGGCGGAAGATCGGAGAAACATTTGACCCGGCGACAGACGATGCACGAGGCGGCAACGGTTGTAGAGGGAAGGTGTTCTTGTTTCAGAAAACTGCCCTTTATAGATGCAATATGGCTGGAAAGCCTGCTGTTTTAACTCGTGTGGTGGACAGCATGACTAACAACTTGAGACCTACACGTGCCGAAGCTACTGATGTTGCCAATGCTGTACTTGATGGAAGTGATGCAATTCTTCTTGGGGCTGAGACATTGCGTGGATTATATCCAGTAGAAACCGTTTCAACTGTTAGTAGAATATGCGCTGAGTCAGAGAAGGTTTTCAATCAAGATTTGTATTTCAAGAAGGCAGTCAAACACATTGGGGAGCCAATGTCACACTTGGAATCTATTGCCTCCTCAGCGGTTAGGGCAGCCATTAAAGTGAAGGCTTCCGTGATTATATGCTTTACTTCATCTGGAAGGGCTGCTAGATTAATCGCAAAGTATAGGCCAACAATGCCCGTTATATCTGTTGTCATTCCAAGACTGAAGACAGATCAATTAAGGTGGAGTCTGAGTGGGGCATTTGAGGCTCGACAATCACTAATTATCAGAGGACTTTTCCCTGTGCTTGCTGATCCTCAACACCTAGCGGACTCTAACAATGCAACGAATGAGTCAGTTCTGAAGGCTGCTCTAGATCATGGAAAGTTAGCAGGAATCATTAAGGCACATGACCGTGTAGTGGTTTGCCAGAAAGTTGGGGATGCATCAATTTGGTCCACCTATGGCGCCGCCTGTGCACAGGACACCCCACATTGGTTCTGTTCTGGGTGA | 1872 | 45.46 | MHSNHLLLEEPIRMASILEPSKASFFPTMTKIVGTLGPKSRSVELISACLRAGMSVARFDFSWGDPDYHQETLENLKMAVKSTKKLCAVMLDTAGPEVLVVNRSEKSIPLQEDGFVVLTPNQELEPSSELLPINYDGLSKVVKKGDTLFLGQYLFTGSETTSVWLEVSEVKGDDVVCVVKNSATLVGSMYTLHAAEIHIDLPTLTEKDKEIIATWGVKNKIDFLSLSHARHAEDVRQARQFLSKLGDLSQTQIFAKIESVEGLTHFDDILKEADGIILARGNLGLDLPPEKITGGDRRKPADNSGRWFTQGPPTMPTHEQSTRTEKQQPMTKKQHNCEIPAKGKRPTNVNDRWRKIGETFDPATDDARGGNGCRGKVFLFQKTALYRCNMAGKPAVLTRVVDSMTNNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETVSTVSRICAESEKVFNQDLYFKKAVKHIGEPMSHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPRLKTDQLRWSLSGAFEARQSLIIRGLFPVLADPQHLADSNNATNESVLKAALDHGKLAGIIKAHDRVVVCQKVGDASIWSTYGAACAQDTPHWFCSG | 623 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 24617048 | 24632837 | - | CmPI595203_04g010080.1 | Cmu04g1008 | 414593 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu04g1008 | 623 | FunFam | Pyruvate kinase | 96 | 202 | - | - | |
| Cmu04g1008 | 623 | Pfam | Pyruvate kinase, barrel domain | 30 | 293 | IPR015793 | GO:0000287(InterPro)|GO:0004743(InterPro)|GO:0006096(InterPro)|GO:0030955(InterPro) | |
| Cmu04g1008 | 623 | Pfam | Pyruvate kinase, barrel domain | 375 | 445 | IPR015793 | GO:0000287(InterPro)|GO:0004743(InterPro)|GO:0006096(InterPro)|GO:0030955(InterPro) | |
| Cmu04g1008 | 623 | Gene3D | - | 30 | 292 | IPR040442 | - | |
| Cmu04g1008 | 623 | Gene3D | - | 446 | 604 | IPR036918 | - | |
| Cmu04g1008 | 623 | MobiDBLite | consensus disorder prediction | 325 | 349 | - | - | |
| Cmu04g1008 | 623 | Gene3D | - | 96 | 202 | IPR015806 | GO:0004743(InterPro)|GO:0006096(InterPro) | |
| Cmu04g1008 | 623 | SUPERFAMILY | Phosphoenolpyruvate/pyruvate domain | 7 | 292 | IPR015813 | GO:0003824(InterPro) | |
| Cmu04g1008 | 623 | SUPERFAMILY | PK beta-barrel domain-like | 96 | 186 | IPR011037 | - | |
| Cmu04g1008 | 623 | PRINTS | Pyruvate kinase family signature | 280 | 304 | IPR001697 | GO:0000287(InterPro)|GO:0004743(InterPro)|GO:0006096(InterPro)|GO:0030955(InterPro) | |
| Cmu04g1008 | 623 | PRINTS | Pyruvate kinase family signature | 85 | 101 | IPR001697 | GO:0000287(InterPro)|GO:0004743(InterPro)|GO:0006096(InterPro)|GO:0030955(InterPro) | |
| Cmu04g1008 | 623 | PRINTS | Pyruvate kinase family signature | 221 | 235 | IPR001697 | GO:0000287(InterPro)|GO:0004743(InterPro)|GO:0006096(InterPro)|GO:0030955(InterPro) | |
| Cmu04g1008 | 623 | PRINTS | Pyruvate kinase family signature | 253 | 279 | IPR001697 | GO:0000287(InterPro)|GO:0004743(InterPro)|GO:0006096(InterPro)|GO:0030955(InterPro) | |
| Cmu04g1008 | 623 | SUPERFAMILY | Phosphoenolpyruvate/pyruvate domain | 376 | 460 | IPR015813 | GO:0003824(InterPro) | |
| Cmu04g1008 | 623 | Gene3D | - | 376 | 445 | IPR040442 | - | |
| Cmu04g1008 | 623 | PANTHER | PYRUVATE KINASE | 13 | 292 | IPR001697 | GO:0000287(InterPro)|GO:0004743(PANTHER)|GO:0004743(InterPro)|GO:0005737(PANTHER)|GO:0006096(InterPro)|GO:0006096(PANTHER)|GO:0030955(InterPro) | |
| Cmu04g1008 | 623 | SUPERFAMILY | PK C-terminal domain-like | 443 | 598 | IPR036918 | - | |
| Cmu04g1008 | 623 | FunFam | Pyruvate kinase | 456 | 598 | - | - | |
| Cmu04g1008 | 623 | Pfam | Pyruvate kinase, alpha/beta domain | 480 | 599 | IPR015795 | - | |
| Cmu04g1008 | 623 | MobiDBLite | consensus disorder prediction | 307 | 324 | - | - | |
| Cmu04g1008 | 623 | MobiDBLite | consensus disorder prediction | 289 | 349 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu04g1008 | Cmu-Chr4:24617048 | Cmu11g1294 | Cmu-Chr11:25150730 | 3.40E-95 | dispersed | |
| Cmu04g1008 | Cmu-Chr4:24617048 | Cmu04g1009 | Cmu-Chr4:24638926 | 2.70E-249 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu04g1008 | K00873 | - | csv:101206620 | 549.28 |