Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1030 ATGAAGCTGCACGAGAATCTTTTTGTATTTGTATTGCTTCTTTGGCTTGTTGCCTCATTTATGATCCACGGTTCAAACCACCATGAAATTAGAAAGCCATACATCGTGTATATGGGAGACTTGCCCGGCGGATCTCTGTCGTCCACGCTGGCGGATGACCACCACAACCTGCTTTTGGACGCCATTGGAGATGAAAAGATAGCGAGAGAGTCCAAAATCTACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCAAGACTTTTGCCTCACGAAGCCACCAAGCTGTCAAATGAGGAGGGTGTGGTTTCGGTATTTCGTAGCAGAAAGCAAAGAGTAGTGACGACAAGATCCTGGGACTTTTTGGGATTAGATCATCATTATTCCAAACGTAAACCTAAAATTGAGTCTAATCTCATTGTCGCCGTTTTGGATACAGGGATTTGGATTGACAGTCCTAGTTTCAACGATGAAGGCTATGGCCCACCACCCTCTAAATGGAAGGGCAAATGCGTCACTGGTCCCAACTTCACAGCCTGCAACAACAAAGTAATCGGTGCGAATTACTTCGATCTGGAAAACGTAAGCCAATATCCAGAGTCGAGCGTGGCGGACACGGAGGGCCACGGCTCTCACACGGCGTCCACGGTGGCAGGTTCGGCCGTGGAGGGGGCGAGCTTGTACGGCCTGGCCAAAGGGACGGCGCGCGGCGGCGTGCCTTCAGCTCGAATTGCAGTCTACAAAGTGTGTTGGAGCATTTTCTGCAGCGAAATGGACGTTCTTGCTGGCTTCGATGAGGCAATCGCCGATGGCGTCGATTTGATTTCCGTCTCCATAGGGTCGCCGCCGATGGATTTCTTCAGGGACAGCCAAGCAATTGGGGCTTTTCATGCCATGAAGAAGGGAATTTTGACGTCCTGCGCCGCCGGCAACGACGGCCCTGAATTGTCCACCGTCGAGAATGTGGCGCCCTGGATTATGACCGTCGCTGCTACGGCCATTGATAGACGGTTCGTCACCGCTTTCAAACTCGGTAATGGCAACAAATTTACTGGACGTTCCATCAACACCTTCTCGCCAGAGAAAGAAATGTACTCTCTTACAAGCGGAGCCAAAGCGTCCAACAATGGCACACCCTATCAAGGAAATGCAAGTGCTTGTGATCCAGAAGCTATAAGCCAAAGCAAAGTGAAGGGAAAGATTGTATATTGCTTGAAAACTTACACAGACCCCTACATCAAATCCTTAGGAGGCACTGGAGTCATTCAACTCACTCGACAACAAGCTGATTATTCCTCCATTTTGCTTCTTCCTGGGGTTACCATCCCCTCACTCTCTGGCAAATACATTGATCTTTATATCAACTCCACCAAGAATCCTAAAGCTGTCATTTATAAGAGTAAAACTGTCAGAATTGATGCTCCCTTTGTTGCTTCTTTCTCATCTAGAGGGCCTCAGTTTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGAAATCTTGGCTGCTTATACAAAACTAGCGAGTTTGACAGGGGATATGTCAGACAGTAGATATAGTTTATTCACTGTAATGTCAGGTACATCCATGGCCTGTCCTCATGCCACGGCGGCGGCTGCATATGTTAAGTCATTCCACCCCGACTGGTCTCCGGCTGCGGTCAAGTCTGCTCTCATGACCACTGCAACTCCAATGAAGATCAAATCCAAGGACGCTGTACTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCAGTGCATCCCGGCCTTATTTACAACATTTCGTTCAACTCCTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATCGGCCTACTTGATGGTAACAAGAAGCACAACTGCTCCAAGATCAAGCCTGCACAAGGAACCGATGGTCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTGGTTCAGCCATCAAGGCGGTCTTTTATCGAACAGTGACTCATGTTGGGTATGGTCCATCATTGTACAGGGCAAATATATCATCTCCAGATGGCCTATCTGTCAAAGTTTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACGAAAACATTTAAAGTTGTGGTGAAGGGAAAACCTATGCCAGAAGGAATATGGATTCGATCAGCTTTACTTGAATGGAACGACTCTAAACACATAGTTAGAAGCAATATCCTTATCTACAGGAAATTGATCTAA 2235 47.11 MKLHENLFVFVLLLWLVASFMIHGSNHHEIRKPYIVYMGDLPGGSLSSTLADDHHNLLLDAIGDEKIARESKIYSYGKSFNGFAARLLPHEATKLSNEEGVVSVFRSRKQRVVTTRSWDFLGLDHHYSKRKPKIESNLIVAVLDTGIWIDSPSFNDEGYGPPPSKWKGKCVTGPNFTACNNKVIGANYFDLENVSQYPESSVADTEGHGSHTASTVAGSAVEGASLYGLAKGTARGGVPSARIAVYKVCWSIFCSEMDVLAGFDEAIADGVDLISVSIGSPPMDFFRDSQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGNKFTGRSINTFSPEKEMYSLTSGAKASNNGTPYQGNASACDPEAISQSKVKGKIVYCLKTYTDPYIKSLGGTGVIQLTRQQADYSSILLLPGVTIPSLSGKYIDLYINSTKNPKAVIYKSKTVRIDAPFVASFSSRGPQFISSNILKPDLSAPGIEILAAYTKLASLTGDMSDSRYSLFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAVLGSGAGQINPTKAVHPGLIYNISFNSYISFLCKEGYNSTTIGLLDGNKKHNCSKIKPAQGTDGLNYPTMHKQLSDPGSAIKAVFYRTVTHVGYGPSLYRANISSPDGLSVKVFPDTLNFVKLHETKTFKVVVKGKPMPEGIWIRSALLEWNDSKHIVRSNILIYRKLI 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24874720 24879170 - CmPI595203_04g010300.1 Cmu04g1030 414615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1030 744 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Cmu04g1030 744 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cmu04g1030 744 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Cmu04g1030 744 Pfam Fibronectin type-III domain 640 739 IPR041469 -
Cmu04g1030 744 Gene3D - 607 742 - -
Cmu04g1030 744 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 140 150 IPR023827 -
Cmu04g1030 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Cmu04g1030 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 736 IPR045051 -
Cmu04g1030 744 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Cmu04g1030 744 SUPERFAMILY Subtilisin-like 5 617 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu04g1030 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Cmu04g1030 744 Pfam Subtilase family 136 579 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu04g1030 744 CDD Peptidases_S8_3 114 566 IPR034197 -
Cmu04g1030 744 CDD PA_subtilisin_like 341 463 - -
Cmu04g1030 744 Gene3D - 334 469 - -
Cmu04g1030 744 Gene3D Peptidase S8/S53 domain 138 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu04g1030 744 ProSiteProfiles Serine proteases, subtilase domain profile. 117 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1030 Cmu-Chr4:24874720 Cmu07g0676 Cmu-Chr7:11734245 8.60E-194 dispersed
Cmu01g0099 Cmu-Chr1:851319 Cmu04g1030 Cmu-Chr4:24874720 9.30E-168 transposed
Cmu05g2240 Cmu-Chr5:31845828 Cmu04g1030 Cmu-Chr4:24874720 1.70E-165 transposed
Cmu10g2639 Cmu-Chr10:33141908 Cmu04g1030 Cmu-Chr4:24874720 4.40E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1030 - - - 0.0